| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2461 |
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| Symbol | |
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| ID | 4668815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2683831 |
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| End bp | 2686404 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639823666 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_970810 |
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| Protein GI | 120611132 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.897717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCC CTTCCCCCGT GCCCGCCGTC CCGGCGGAGC CTTCCGTGGT CACCGCGCCG
GCCCGCTGGT GGCGCACCTG GTGGCGCAGC CTTTCTCCTA CCCGGCAAGA CCGCCTGGCG
GCTCTGGCGC CGCTGGCTGC CGTGCTCATG TTCCTCGCCG CGATCGTGGC GGCCTTCTGG
TATCTGCGCG CCGAAGAAGG CGAGCGCGAA CAGGAGGCGC TGCGCCGCGA CGTCGAGTAC
GCGCAGCAAC GCGTGCGCCT GCGCCTGCTG GAGCGCCAGG AGCAGATCAT GCGCATCGCG
CGCGACCTCT CCAACCAGGA TCTCGAACGC GCGGACTTCG TGTCCCGCGC GGAAGGGCTG
ATCAGCCAGT ACCCCGAACT GCAGGCCATC ACCTGGATCG ACGACCACCG CCGTATCCGG
GCCAGCCATG CGGCGCCCAC GCTGCCCAGC AGCCAGTTGC GCGTGGCGGG CGAAGTACTG
CGCAATGGCG ACACGGCCGA CACCTTCGGC ATCGCACGCG ACCTGCAGCA GCCCGTGTAC
GCGCAGCCGC TGGCCGACCC GGGACGGGGC GAGGCCGCGC CCCTGCTGCA GTTGCAGGTG
CCCCTCGTGG CGCAGGGCAA GTTCACGGGC GTGGTGCTGG CCGAATATTC GGTGGACAGC
CTGCTGCGCT ACGGCACGCC CACCGAAGTG CTCGCGCGCT ACGCGGTCAC GATGCTCGAC
GGCCGCGCCC AGTTGCTGGC CGGCACGCCG CTGCCGCCGC GCGGGCGCGC TTCGCCCTGG
CAGCCCTGGG CCACCCGCGC CAACCAGTAC GAAGTGTTCG TGTCCCCCGT GGGCAACGGC
CTCGTGCTGC GCGCACAGGC CTACCGCACT TCCCTGGGGG TGGTGGGCAG CGGCCTCTTC
TGGCTCGTGG GCACGTTGAG CGCCATGACG GCCTGGATGC TGATCGCCAA CTGGCGCCAC
ACCCGCCGCC GCCTGCGCAC GCAGGAGGCA CTGGTGGCCG AAACCAACTT CCGCCGCGCG
ATGGAAAACT CCATGGTCAC CGGCATGCGC GCGCTCGACA TGAACGGCCG CATGACCTAC
GTGAACGCCG CCTTCTGCCA GATGACCGGC TGGAACGCGG AGGACCTGAT CGGCCAGTCC
CCGCCCTACA CCTACTGGCC GGAAGCCGAC CACGAAGTGC TGCATTCGAA GCTGCGCGAC
GAGCTCAGCG GCAAGCAGAC GGTCGGGGGC TTCCAGGTGC GGGTGAAACG CAAGAACGGC
ACGCTCTTCG ACGCGCGGCT GTACGTGTCG CCGCTCATCG ACGCTCACGG GCAGCAGACC
GGCTGGATGA CCTCGATGAC CGACATCACC GAGCCCAACC GCGTGCGCGA ACAGCTCACG
GCGTCCCATG AGCGCTTCAC CATCGTGCTG GAATCGCTGG ACGCCTCCGT CTCCGTCGCG
CCCCTGGGCA GCGAGGAGCT GCTCTTCGCG AACAAGCTGT ACCGCCAGTG GTTCGGCTCG
CAGACCGGCG GGCACCTGCA GCTCGTCGCC CAGGCGGGCG TCCTGCCGGC CGGCAGCTCC
AGCGCGGGCA GCATGGACGA CGAGGACGCC CTCATGGGCC TGCCCACCGA TACGCTCATC
GACGCGCGCT CGGAGAACGC CGAGATCTAC CTGCCCGACC TCGGCAAATG GCTGGAAGTG
CGCTCCCGCT ACCTGAACTG GGTGGACGGC CGCCTGGCCC AGATGGTGAT CGCCACCGAC
ATCACCCCGC GCCGCCAGGC CGAGGAGCAG GCCGCGCGCC AGGCCGAGCG CGCGCAGTCG
GTGAGCCGCC TGATCACCAT GGGCGAGATG GCCTCCAGCG TGGCGCACGA GCTGAACCAG
CCGCTCACGG CCATCAGCAA CTATTGCAGC GGCATGGTTT CGCGCATCAA GAGCCAGCAG
ATCACGGAGG ACGCCCTCCT CTCCGCGCTG GAGAAAACAG CGCACCAGGC GCAGCGCGCG
GGCCAGATCA TCCAGCGCAT CCGCGCGTTC GTGAAGAAGA GCGAACCCAA CCGCACCCTC
GCCGACGTCC AGCACATGGT CAGCGAGGCA GTGGAACTCG CGGACATCGA GCTGCGCAGG
CACAACGTGC GTCTCACCCA CTACGTGGCC GCGCGCCTGC CGCCCGTGAT GGCCGACACC
ATCCTGATCG AGCAGGTGCT CATCAACCTC ATGAAGAACG GCGCGGAATC CATCCAGCAG
GCCGGGCGCC CGCCAGCCCG CCGCAGTGTG GAACTGCGCG TGGTGCCGCG CCCGCTGGAC
AGCCAGGACG GCATCGAATT CGCGGTGCAG GACACCGGCA AGGGACTGGC CCCGGAAGTG
CTGGAACACC TCTTCGAGGC CTTCTTCTCC ACCAAGCAGG AAGGCATGGG CATCGGCCTG
AACCTGTGCC GCAGCATCGT GGAATCGCAC CAGGGCCGCA TGCAGGCGGA GAACATCTAC
AATGGCCCGG AGGTCACCGG CTGCCGATTC TCCTTCTGGC TTCCGCTCGC CCAGCCTGCG
GATGACACTA CGAATTCTGT AGCAAAAGCA TCTACCCCAA GGACTCCCGC ATGA
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| Protein sequence | MDRPSPVPAV PAEPSVVTAP ARWWRTWWRS LSPTRQDRLA ALAPLAAVLM FLAAIVAAFW
YLRAEEGERE QEALRRDVEY AQQRVRLRLL ERQEQIMRIA RDLSNQDLER ADFVSRAEGL
ISQYPELQAI TWIDDHRRIR ASHAAPTLPS SQLRVAGEVL RNGDTADTFG IARDLQQPVY
AQPLADPGRG EAAPLLQLQV PLVAQGKFTG VVLAEYSVDS LLRYGTPTEV LARYAVTMLD
GRAQLLAGTP LPPRGRASPW QPWATRANQY EVFVSPVGNG LVLRAQAYRT SLGVVGSGLF
WLVGTLSAMT AWMLIANWRH TRRRLRTQEA LVAETNFRRA MENSMVTGMR ALDMNGRMTY
VNAAFCQMTG WNAEDLIGQS PPYTYWPEAD HEVLHSKLRD ELSGKQTVGG FQVRVKRKNG
TLFDARLYVS PLIDAHGQQT GWMTSMTDIT EPNRVREQLT ASHERFTIVL ESLDASVSVA
PLGSEELLFA NKLYRQWFGS QTGGHLQLVA QAGVLPAGSS SAGSMDDEDA LMGLPTDTLI
DARSENAEIY LPDLGKWLEV RSRYLNWVDG RLAQMVIATD ITPRRQAEEQ AARQAERAQS
VSRLITMGEM ASSVAHELNQ PLTAISNYCS GMVSRIKSQQ ITEDALLSAL EKTAHQAQRA
GQIIQRIRAF VKKSEPNRTL ADVQHMVSEA VELADIELRR HNVRLTHYVA ARLPPVMADT
ILIEQVLINL MKNGAESIQQ AGRPPARRSV ELRVVPRPLD SQDGIEFAVQ DTGKGLAPEV
LEHLFEAFFS TKQEGMGIGL NLCRSIVESH QGRMQAENIY NGPEVTGCRF SFWLPLAQPA
DDTTNSVAKA STPRTPA
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