Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2427 |
Symbol | |
ID | 4666847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2648154 |
End bp | 2649248 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639823630 |
Product | integrase catalytic subunit |
Protein accession | YP_970776 |
Protein GI | 120611098 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.8611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCC TGCAAGATCG CCAGCAACTG GCCCGCGACA TCCAGATCGC CCACGACAGC GGCGCGCGGC TGCACCTGGC CTGTCAGGTC GCCGGTATCG ACGTGCGCAC GCTGCAGCGC TACAAGGCTG CGGGTGGGCT GGCCCAGGGC GATGCACGGC CTCAGGCGCT GCGCCCCACG CCAAGCCATG CCTTGACCGA GGCCGAACGC CAGCGGCTGG TGCAGGTGGC CAACGCACCG CGCTTTGCCG ACGTGCCGCC GGCGCGCATC GTGCCCATGT TGGCCGACGA GGGTGTCTAC CTGGCCAGCG AATCGAGCTT CGCGCGGGTG CTGCGTGCGC ACGGGCAGAA CGCCCATCGC GGTCGCGCCC GATCGCCGCA GGCCAGCCGC GCGCCCAGCA CCCATGTGGC CACGGCGCCC GGCCAGGTGT GGTGCTGGGA CATGACCTAT CTGCCGGCCC GCGTCGCCGG GCGCTGGTTC CACCTGTACC TGATCATGGA TCTGTACAGC CGCAAGATCG TGGGCTTCGA GGTGCACGAC AGCGACCAGG CCGAGCATGC CGCACGACTG GTGCGCCGCA CGGCGCTGGC CGAGGGCATC GCCGCGCGCG CCGACAAGCC AGTGCTGCAC GGCGACAACG GAGCCACGTT GAAGGCCACC ACGGTGCTGG CCATGCTGCA CTGGTTGGGC GTCAAGCCTT CGTACTCGCG CCCCCGCGTG AGTGACGACA ACGCCTTCGT GGAAAGCCTG TTCCGTACCG CCAAATACCG CCCCGAGTTC CCCGCCAGCG GCGGCTTCGA CGATCTGGAC CAGGCACGCC AGTGGGCCAG CGGCTTCGTG CATTGGTACA ACTGCGAGCA CCGCCACAGC GCGATCGGCT ACGTCACGCC GACGCAGCGC CATGCCGGGC AGGACCAGGC CATCCTGCAG GCTCGCCATC ACCTTTACAC CCAGGCCCGA CAGCGCAACC CCGCGCGCTG GTCGGGCAGC ACCCGCAACT GGGCGCCGGT CCAATCGGTC ACGCTCAACC CTGAGCGCGA CGGCATCTCC AATGCCGCGG CGACCGCATC GAATACGCAG CCTCGGGCTG CTTGA
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Protein sequence | MIGLQDRQQL ARDIQIAHDS GARLHLACQV AGIDVRTLQR YKAAGGLAQG DARPQALRPT PSHALTEAER QRLVQVANAP RFADVPPARI VPMLADEGVY LASESSFARV LRAHGQNAHR GRARSPQASR APSTHVATAP GQVWCWDMTY LPARVAGRWF HLYLIMDLYS RKIVGFEVHD SDQAEHAARL VRRTALAEGI AARADKPVLH GDNGATLKAT TVLAMLHWLG VKPSYSRPRV SDDNAFVESL FRTAKYRPEF PASGGFDDLD QARQWASGFV HWYNCEHRHS AIGYVTPTQR HAGQDQAILQ ARHHLYTQAR QRNPARWSGS TRNWAPVQSV TLNPERDGIS NAAATASNTQ PRAA
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