| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2424 |
|---|
| Symbol | |
|---|
| ID | 4667524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2646146 |
|---|
| End bp | 2647114 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639823627 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_970773 |
|---|
| Protein GI | 120611095 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAC GCCTGTCCAA TTCGGTTCTG GCCTGGCTGC GCTGTTTCGA TGCGGCCGCA
CGGCAGGGCA GCTTCACACG CGCCGCCGCG GAGCTGTGCA TCACCCAGGG CGCGGTGAGC
CAGAAGGTGA AGCAACTGGA ACGCTGGCTG GGACGTCCCC TGTTCCTGCG CACCCCGCGG
TTACTGGTGC CCACCCCGGA GGGCAAATGG CTGGCCGTGG TGCTGCGCGA AAGCTTCGAG
GCCATCGAGG GCACGCTCGC GCAGATGCGG CGCTCCACCC CGGCCCACGC TGCAGCCACG
CTGAGCTGCT CACCTTCGTT CGCCATGCAG TGGCTTACGC CACGGCTGGG CGAATTCTTC
CGCCGGCACC CCGACACCGG GCTGCGCGTG TTCGGAGAGT TCCACCGCAT CGACCGCACC
CGCATGGTGC GCGACGGGGT CGAGGCGGCC GTCCGCTTCG ACCCGGAGGA GTACACCGAC
CTGGACGCCA CCGGGTTCCT CGATGAATGG CTGGTCCCCG TGGCCAGCCC GGCTTTCGTA
GCGGCCCACC CGGACCTGCG GGATGCGCCG GCCAGGCTGC GGCCGGAATG GCTGCTGCAC
GACGGCAGCG CCTGGGAAGG AGCCGACACC TTCGAGGAGT GGCAGCACTG GTTCGCCGCG
CAGGGTGCGC CATGCCCGGA CTGGGGAGGC GGCCCCCAGT TCAACCTGTC CCAGCTGGCG
GTGGGAGCAG CCATCACCGG CCAGGGCATC GCCATGGGTC GTGCCGCGCT CGTGCTCGAA
GACGTGGCGG CCGGCCGGCT CGTACCGCTG TGTTCCTGGA GCACGCTCTC CCGGGCGCGC
TACGCCTTCG TGAGTTCGCC CCAGGCGGGG CCTGCCATGC TGCGCGTGCG GGACTGGCTG
GTGGAGGAAG GGCAGCGCTT CAAAGAGGCG CGTGCGCAGG TGCTGCCACC ATTGTTAATC
TGCATCTAG
|
|---|
| Protein sequence | MDSRLSNSVL AWLRCFDAAA RQGSFTRAAA ELCITQGAVS QKVKQLERWL GRPLFLRTPR
LLVPTPEGKW LAVVLRESFE AIEGTLAQMR RSTPAHAAAT LSCSPSFAMQ WLTPRLGEFF
RRHPDTGLRV FGEFHRIDRT RMVRDGVEAA VRFDPEEYTD LDATGFLDEW LVPVASPAFV
AAHPDLRDAP ARLRPEWLLH DGSAWEGADT FEEWQHWFAA QGAPCPDWGG GPQFNLSQLA
VGAAITGQGI AMGRAALVLE DVAAGRLVPL CSWSTLSRAR YAFVSSPQAG PAMLRVRDWL
VEEGQRFKEA RAQVLPPLLI CI
|
|---|
| |