Gene Aave_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2420 
Symbol 
ID4668467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2642835 
End bp2644220 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content71% 
IMG OID639823623 
ProductL-sorbosone dehydrogenase 
Protein accessionYP_970769 
Protein GI120611091 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.840322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCTT CATTCCATCG CCTTGCCCTC CGAATCACCG GCCATGGCCG GGTGGCCGCG 
TCCCTGCTGG TGGTGGCCGC GCTGGCCGGC TGCGGAGATA CCGCCCGCCT GCCTGCCGAG
GCAGGCATCG GCCCCCGGCC CGCGCTGCCG GAACCGCACA GGTCCCTGAT TCCCACCGTG
CACATCGCGC CCGCCAAGGG GTGGCCGGAC GGGGGCGCGC CGCAGCCCAT GGCCGGCCTG
TCCGTGACGC CTTTCGCCCG CGGGCTCGAA CATCCCCGCT GGGTGGTGGT GCTGCCCAAC
GGCGACGTGC TCGTGGCCGA GAGCGACAAG CCGGCACCCG AAGGTCCGCC CCCGGACGAC
GGGTGGGTCA AGAAAGTGCG CAACTGGGTC ATGGGCAAGG TCATGGCCCG TGCCGGCTCC
GGCAACCCGT CAGCCAACCG CATCACGCTC CTGCGCGATG CCGACGGGGA CGGCGTGGCG
GAAACGCGCA GCGCGTTCCT GCAGGGGCTG CATTCTCCTT TCGGCATGGC ACTGGTCGGC
AGCGAGTTCT ACGTCGCCAA CACCGATGCC GTCGTGCGGT TTCCTTATGC CCCGGGACAG
ACCGCCATCG CGGCCGCGCC GGCCAAGGTC GTGGACCTGC CCTCGCGGCC GCTCAACCAT
CACTGGACCA AGAACCTCAT CGCCAGCCCC GATGGTGCGA AGCTGTATGT CACGGTCGGC
TCCAACAGCA ACGTGGCCGA GAACGGCATG GAGGCGGAAG CCGGCCGCGC GGCCATCTGG
GAAGTCGATC GCGCCACGGG CGCGCACCGC GTCTTCGCGA GCGGCTTGCG CAACCCCAAT
GGCATGGGCT GGGAGCCGGG CTCCGGCAGG CTGTGGACCG TGGTGAATGA GCGCGACGAG
ATCGGCAGCG ACCTCGTGCC CGACTACCTC ACCTCGGTGA AGGAGGGCGG CTTCTACGGC
TGGCCCTACA GCTATTGGGG CGGGAACGTG GATGTGCGTG TCCAGCCTCC ACGGCCGGAT
CTGGTCGAGA AGGCCATCGT GCCGGATTAC GCCCTGGGCA ACCACGTGGC GCCGCTGGGC
ATGGCTTTCG CGGGGGGCGG CAGCCCGGCC GCTCAACCCG TGGCTCCGCA GCTCGCGCAG
GGTGTGTTTG TCGGCCTGCA CGGCTCATGG AACCGCAAGC CGCGCAGTGG CTACAAGGTG
GTGTTCGTGC CGTTCAGGAA CGGCAAACCC GACGGCATGC CCCTGGATGT GTTGACCGGA
TTCGTGAGCG GCGATGGCGA CGCCTGGGGC CGGCCCGTGG GCGTGGCGCT GGACGGGCGG
GGCGGCCTGC TCGTGGCCGA CGACGTCGGC AACACCCTGT GGCGCGTGGC GGCGGCGCGG
CCGTGA
 
Protein sequence
MRPSFHRLAL RITGHGRVAA SLLVVAALAG CGDTARLPAE AGIGPRPALP EPHRSLIPTV 
HIAPAKGWPD GGAPQPMAGL SVTPFARGLE HPRWVVVLPN GDVLVAESDK PAPEGPPPDD
GWVKKVRNWV MGKVMARAGS GNPSANRITL LRDADGDGVA ETRSAFLQGL HSPFGMALVG
SEFYVANTDA VVRFPYAPGQ TAIAAAPAKV VDLPSRPLNH HWTKNLIASP DGAKLYVTVG
SNSNVAENGM EAEAGRAAIW EVDRATGAHR VFASGLRNPN GMGWEPGSGR LWTVVNERDE
IGSDLVPDYL TSVKEGGFYG WPYSYWGGNV DVRVQPPRPD LVEKAIVPDY ALGNHVAPLG
MAFAGGGSPA AQPVAPQLAQ GVFVGLHGSW NRKPRSGYKV VFVPFRNGKP DGMPLDVLTG
FVSGDGDAWG RPVGVALDGR GGLLVADDVG NTLWRVAAAR P