Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2395 |
Symbol | |
ID | 4668392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2617107 |
End bp | 2618543 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639823598 |
Product | zonular occludens toxin |
Protein accession | YP_970744 |
Protein GI | 120611066 |
COG category | [R] General function prediction only |
COG ID | [COG4128] Zonula occludens toxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.482518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATT TGCTCGAAGG CGTCCCCGGG TCGGGGAAGA GCTATGAGGC CGTGGCCTAC CACGTCATTC CGGCCCTTAA GTCCGGCCGC AAGGTCGTGA CCAACCTGCC CCTTAACCTG GAGGCGATCC GCGCTGTGAA TCCGGACTGG GCCGAGCTCC TGGAAATCCG CCGCGGCCCT CAGCCGGTGC TTGGGTCATG GGATGCGGAG GCCGCCAACC GCGGTGAGCC CGCCTACCTG GTCGGAACCT TCCCCGATGG CGTGGTGCCC GAGCTCACGC ACAAGGGCTT GCCGGCTGTG CCTCCACCGT CCAATCAGCG CCTGTTCGCT GGCGTTTGGG ACTTCTACGA CACCTGGCGC GGCGAGGGCA ACATTGGCCC GCTCTACGTC ATCGACGAGT GCCATGTGTC TTTCCCTCGC GAGCAGTTGC GCAAGGGCAA GATGACGCCC GATGAGGTCA TCCAGTGGTT CAAGATCAGC CGGCATTTCG GCGCCGACGT GCTGCTCATG ACCCAGCGCA TGCGCGCTCT CGAAGAGGAC GTCGCCGGCC TGGCCGAGAT GCACATCCGC GTGCGCAAAG TCGCCTTCCT GGGCCGCCCG AACGAGTATG TCCGCAAGGT CTTCGCCGGC CTGCGCGGTG GCGAGGTGTC CAGTGACATT CGGCCCTACA AGCCCGAGTT CTTCGGCTTC TACAAGAGCC ATACGCAGGG CGCTGCGGTG ATCGAAGCTG CCGCGCAGGA TGTCGCCCCG TCCACGGTCA AATGGCGTCG TGCCTCGCGC ATCATGTTCG CGCTGTCCGG CGTGGGCTTC ATCTGGTTGG GCTGGCAGAT TTTCGGCCCT GCGCCGGAGC CCAAAAAGCC AGTGCAACAG CCGGCAAAGC TCATGGTTAT GCAGGGTGGC AAGCTGGTGG ATCCAACTGC CTCTGCGTCC CCTGCAGCCC GCCCGCAGGC CGTCGTGGCC ACTGCTGCTC CAGCTGGAGC TCAGACAGTC GCCGCCTCGG CTCCTGCTGC CTCGTCGCTT GCTGCCGTGG TCGTCCCTGC AGGCCCTCTT GAGCCCATGG AGGCGCGCGG CTTGCACCTC GCCGGCTGCA TGACCATGGG CGGCAAGTCG TCTTGCGTCA TCGCGGTGTC CCAAAACGGT CAACCGGTTT TCACGGTCAC GGACGCTGAC CTGGTCACTA TGGGCTACAA GTTCCAGCGC CTGGCGGACT GCGCCGCGGT GGTGACCTGG CGGGGCACTG CTCGCTCCGT GATCTGCGAC CTCCCGCAGG TCGGCATGGC GGTGGCTGGC GTCTCCCGCA AGGCCCAGGC GCAGGCCGAG CAGGCCATGG TCCGCACTGT GCCTGTCCCA GATCTGCGCG ATCAGCCAAG CAACACCGTG ACCGTGGCCG ATGTGGTCCA CCAGGCCCGC ACGGGCACGC TCCCGGTGGC GCAGTAG
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Protein sequence | MINLLEGVPG SGKSYEAVAY HVIPALKSGR KVVTNLPLNL EAIRAVNPDW AELLEIRRGP QPVLGSWDAE AANRGEPAYL VGTFPDGVVP ELTHKGLPAV PPPSNQRLFA GVWDFYDTWR GEGNIGPLYV IDECHVSFPR EQLRKGKMTP DEVIQWFKIS RHFGADVLLM TQRMRALEED VAGLAEMHIR VRKVAFLGRP NEYVRKVFAG LRGGEVSSDI RPYKPEFFGF YKSHTQGAAV IEAAAQDVAP STVKWRRASR IMFALSGVGF IWLGWQIFGP APEPKKPVQQ PAKLMVMQGG KLVDPTASAS PAARPQAVVA TAAPAGAQTV AASAPAASSL AAVVVPAGPL EPMEARGLHL AGCMTMGGKS SCVIAVSQNG QPVFTVTDAD LVTMGYKFQR LADCAAVVTW RGTARSVICD LPQVGMAVAG VSRKAQAQAE QAMVRTVPVP DLRDQPSNTV TVADVVHQAR TGTLPVAQ
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