Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2372 |
Symbol | |
ID | 4667899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2586379 |
End bp | 2588388 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639823575 |
Product | hypothetical protein |
Protein accession | YP_970721 |
Protein GI | 120611043 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000329046 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGCCCCAGC TCTACCTGAA CAACTTCACC ACGCAATTCA TCGCGTCCGT CAAGGCCGCG CCGGCCACCG CCAACCCGGC GGGCGAACTG GACTACGGCG TGCTCCGAGT CTCCGACGGC GCCGCCGGCA CGCTCATCAA CCCGCCGGGT GGCAGCTGGT ATGTGCTGAC CGCCTTCAAG CGCGCCGGCA CCGTGGAATC GGACTACGAG ATCCTGCGCG TCACCGGGGT GGACAACTCT GTGGTGGGCG AGTGCCGGCT GACCGTGCTG CGCGGGCAGG AGGGCACCAC GCCGCGGGCC TACGTGGCCG GCGACCTGGT GGAGCTGCGC CTGACGGCCG GCGGGATCAG CCAGTACGCC CAGACCACCG ACCCGCGCAT GTCCGATCCG CGCACGCCCA CCGGCGCCGC GGGCGGCGTG CTGTCGGGAA ACTACCCGAA CCCGGGCTTC GCCCAGCCCA TGGCGACGGT GGCCCAGATG GAGGGTCGCG TGGAGAAGGT GGCGGGCAAG GGCCTGAGCA CCAACGACTA CACCACCGCC GACCTCGCCA AGCTCGCCGG CATTGCCGAA CAGGCCACGA AGAACGCACC GGACTCGCAG TTGCGCGATC GCAGTACCCA CACTGGCACG CAGCCCATGG CCACGGTGAT GGGGTTGCCG GAAACGCTCG CCACGAAGGT GGACGTGGTG GCCGGCAAGG GGCTGAGCGC GGAGGATTTC TCGACCGCCG AGAAGGTGAA GCTGGCGGGC GTGCAGCCCG GGGCCCAGGT CAACGCGGTG CTGTCCGTGG CGGGCCGCAG CGGCAACGTG GTGCTTCTGC CCGGCGATGT CGGCTTGGGG AGCGTGGACA ACACGGCCGA CGCGGCGAAG CCCGTCAGCG TGCTCCAGGC TGCCGCGATC GCCGCGCGGC TCAACCGGAC CGGCGACCAG ATGACCGGCG ACCTGGCGCT GAAGACCCTC AACGGCAGTC ACCTCGCGGG GACGCGAAAC CGCCTCATCA ACGGACGTTG CAATGTGGCG CAACGTGGTA CGAGCTTCCC TGGTGCGTCC ATCAGCACGG GAAACTATCC GGTGGATCGG CTCGCGTTCA CCGGGTCCTA CACCCCGGCC GTGGCTACGG TGGAGCAGGC CACCGACGGC CCGGCTCTCG ATCCTGGCTT GCGCCGGTGC GCGCGGCTGA CCGTGACGAC GGCAGATCCC GCGATGGAAG GGGGCGACTC CGCAGGGCTC CAGCAGATCA TCGAGGGCTA CAACATCGCC GACCTCTTCG GCGTCACCTT CACCGTGTCG TTCTGGGTGC GCTCCTCTCG GGTGGGGGTT CACTGCCTCG CGCTCTTCAA CGGCGGGTTC GATAAGTCGT TCGTGGCGGA ATACTCGGTC CAAAATGCGA ACACCTGGGA GTTCAAGTCC GTCACCCTGG TGGGCGGGTT GCCGGCCGCG GGCGGCTGGA ACACGTCCTG GGGTCCGGGG CTTTATGTTC GCTGGTGCGT GGGCGTGGGC CCGACCTACC ACACCCAGCC GGGCGCATGG CGCGATGGGC TGTACCTCGG CACATCCAGT CAGGTGAATT GCCTGGACAC CGCGGGCAAC GTCTTCGCCC TGACCGGCTT CCGGCTGGAG TCGGGGGCGG TGGCCACGCC GTTCGAACAC CGGCAAATCG GCGACGAGAT GGACGACTGC CTGCGGTACT TCGAGCAGCT GAACAACGCC AATGCCAATG TGTACGCGAT GGGCATGGTT CCCAACAATT CCCAGGTGTG GGCACTGCTG GAGTACGACA CGAAGCGAGT GGCGCCGAGC CTGAGTTTTC CCGGCAGCGT GGCCAACTTC CAATTCCAGA TCGGGAGCGG GACGCCCTCG TGCACCGATC GACCCTACGC AAATTCCGCC GGCACGAAGC GTGCCCACAT CGTGCTCACC AGCACCAGCG CCGGCCTGGC GGGCGATAGC AAGGCGTGCC TGTGCGTCCT GGCGGGCGAT GCGCGGATCA ACATCAACGC GGAGTTCTGA
|
Protein sequence | MPQLYLNNFT TQFIASVKAA PATANPAGEL DYGVLRVSDG AAGTLINPPG GSWYVLTAFK RAGTVESDYE ILRVTGVDNS VVGECRLTVL RGQEGTTPRA YVAGDLVELR LTAGGISQYA QTTDPRMSDP RTPTGAAGGV LSGNYPNPGF AQPMATVAQM EGRVEKVAGK GLSTNDYTTA DLAKLAGIAE QATKNAPDSQ LRDRSTHTGT QPMATVMGLP ETLATKVDVV AGKGLSAEDF STAEKVKLAG VQPGAQVNAV LSVAGRSGNV VLLPGDVGLG SVDNTADAAK PVSVLQAAAI AARLNRTGDQ MTGDLALKTL NGSHLAGTRN RLINGRCNVA QRGTSFPGAS ISTGNYPVDR LAFTGSYTPA VATVEQATDG PALDPGLRRC ARLTVTTADP AMEGGDSAGL QQIIEGYNIA DLFGVTFTVS FWVRSSRVGV HCLALFNGGF DKSFVAEYSV QNANTWEFKS VTLVGGLPAA GGWNTSWGPG LYVRWCVGVG PTYHTQPGAW RDGLYLGTSS QVNCLDTAGN VFALTGFRLE SGAVATPFEH RQIGDEMDDC LRYFEQLNNA NANVYAMGMV PNNSQVWALL EYDTKRVAPS LSFPGSVANF QFQIGSGTPS CTDRPYANSA GTKRAHIVLT STSAGLAGDS KACLCVLAGD ARININAEF
|
| |