| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2362 |
|---|
| Symbol | |
|---|
| ID | 4666347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2579595 |
|---|
| End bp | 2580242 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639823565 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_970711 |
|---|
| Protein GI | 120611033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0896802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000151345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATC CCATCATCCA GCCTACCGTC GGTAGGGTCG TCTGGTTTCA TCTCTCGAAG
CATCGCGGGC CGACGAGCTT CACCCGTCAG CCCGGCGAGC AGCCTTGCGC CGCGATCATC
ACGAGCGTCC TGGACGACGG CCGCGTGAAT CTGTCGGTGT TCGACTCCGA CGGTGCGGTC
CACAGCTTTC GCTGTGTCGA ATTGGTGCAG GAGGGGCAAC CGGTTCCGTC CTACCCCTAC
TGCGAGTGGA TGCCCTACCA GAAGGGGCAG GCGACGAAGG CCGAAGCGGC GAAGAAGTCG
CCTATCCACG TCGATGCAAA TTCGGCGCTG GTCTATGCGT TGATCGGTGT GGGGGCCAAG
CTGTCGGGCG CTCCGTCCAT CAATCTGCCG GTACTTGACC CCGGCGCCGA CTGGATCGAG
CGCGAGATCC AGCGCAAGTC CGCCGCCGCA CATGCCCAGT TCGCCAACGG CCTGACCCAG
GGCGATGGAA CCACTGCCGA CAGGCTCCAT GCGCTGCGCC TTTCTGAAGA CGCGCGCTCT
GCGAGCGGCA AGGCTGCCGA GGTGCCGGTA TCGCTGCTGC TGCACATCTT CTGCCTGCTT
GTGGCTCGCC TGCCTCTGGC CGGCTGTGGT GCACCTCCCA AAGCCTGA
|
|---|
| Protein sequence | MTNPIIQPTV GRVVWFHLSK HRGPTSFTRQ PGEQPCAAII TSVLDDGRVN LSVFDSDGAV
HSFRCVELVQ EGQPVPSYPY CEWMPYQKGQ ATKAEAAKKS PIHVDANSAL VYALIGVGAK
LSGAPSINLP VLDPGADWIE REIQRKSAAA HAQFANGLTQ GDGTTADRLH ALRLSEDARS
ASGKAAEVPV SLLLHIFCLL VARLPLAGCG APPKA
|
|---|
| |