Gene Aave_2335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2335 
Symbol 
ID4668767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2562387 
End bp2563124 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID639823539 
Productputative phage repressor 
Protein accessionYP_970685 
Protein GI120611007 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00049871 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000160936 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACTCG GCGCACGCAT CAGGTACTAC CGCAACAAGG CAGGGCTCAC GCTCGACCAA 
CTCTCCGAGC TTTCAGGCGT GGAAATGGGC ACGATCAGCG CCCTCGAGGT CCGCGACAGC
ACCCGCTCGG CATACGCGCG CAAGATCGCT TCAGCGCTGG GGCTCACGGT GGATCAATTG
GAGGACGAGT CCGCGGACCA CGACGTGGGC CCAGTGAAGG CAGCTCCGGT GCGTGCAGCC
GAGCCTGACC CCCCCTATCT CGAATTGCCG GGCGATGGCC ACGAGGCCGG CGAACTGGTC
ATCACCCAGT ACCAGGACAT CGGCGGCGCG ATGGGGCATG GCTTCAATCT CACCGACAAT
CCGCCCGGGC ATATCCGATC GTGGCGCGTG ACGCCCGAAT GGTTGAGGCT CAATGTTCCC
AACCACACCG GGGTGAAAAA CCTCTCCATC GTGACGGGGT TCGGCCCATC GATGAAGCCG
ATGTTCAACC CCGGCGACCC GCTCCTAGTG GACACCGGCA TTCGAGTCAT CGACCACGAG
GGCGTCTACT TCTTCCGAGT CGGGGACGAG GGCTTCATCA AGATCATCCA GCGTGTGCCC
CAGTTCGACG GGCCGGGCAT CATCCTGCGG GTCATCTCGA AGAACCCGGA CTATCCCCCC
TACGACCTTT CCCCCAAGAA CCCGCACTTC GAGGTTCTGG GCAAAGTCCT GACCGTCTGG
CGAAGCGAGC AATACTGA
 
Protein sequence
MALGARIRYY RNKAGLTLDQ LSELSGVEMG TISALEVRDS TRSAYARKIA SALGLTVDQL 
EDESADHDVG PVKAAPVRAA EPDPPYLELP GDGHEAGELV ITQYQDIGGA MGHGFNLTDN
PPGHIRSWRV TPEWLRLNVP NHTGVKNLSI VTGFGPSMKP MFNPGDPLLV DTGIRVIDHE
GVYFFRVGDE GFIKIIQRVP QFDGPGIILR VISKNPDYPP YDLSPKNPHF EVLGKVLTVW
RSEQY