| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2325 |
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| Symbol | |
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| ID | 4665769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2554496 |
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| End bp | 2555707 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639823529 |
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| Product | phage integrase family protein |
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| Protein accession | YP_970675 |
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| Protein GI | 120610997 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.633234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000214757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCCGCA AAGCATCATC CGGAGGTGTT AGACCACGCG GCAACCGCAT AGAGGTCCGC
TTCACCTGGG AGGGCAAACA GGTTTCGCCC ACGCTGGACC TGCGGCCCAC GGCCGCCAAC
CTGAAGCACG CGGCGCGACT GCGCGCGACG ATCGTGGAGG AGATCAACCA GGGCAAGTTC
CGCTTCGCCG AGCACTTCCC CGACTACAAG AACCTGACGG CCGTGCAGCC CGCCACGGAT
GAGGAATCCC GCCTCTTCCG CGACTGGGCG AAGGTGTGGG GCCGGCTTTC GGCCCGTGGG
CTGGAGCACT CCTCGCACGC CGTCTACCTC CGCCATCTGG CCGCCTACTG GCTCCCGGTC
TTCGGCCACC TGCCGCCGGA GCGCATTACG CACGTCATGG TGCTCGAGCG ACTGGCCGAC
CTGTCAGCCC CCCGCCTGGA CGAGAAGACG GGCAAAACAC GCCGCGCGCT GGCACGCAAG
ACGCAGAACA ACATCTTGAT CCCGCTGCGG GGGGTGTTCG AGCTGATCTG CAAGGCCCGC
ACCGAGGTGG TGGACCCTAC CGACGGCATC GACAACCAGA AGGTGCAGAA GGCCATGCCC
GACCCCTTCT CCCCCGATGA GGTGGAGGTG ATCCTGCGCG CGCTGGAGGA GCAGGCCGGA
AGCACATGGG CGGATTACTT CGAGTTCTCC TTCTTCGCCG GCTTCCGTGC GAGCGAGCAG
ATCGCACTCC TCTGGGAGGA TGTGGATCAT CGCAGCCGGA CGGCGCTGGT GTGGCGAACC
AGGGTGCTGA CCAAGGACAA GGACCGCACC AAGACCAATG TGGAACGGCA GGTGGAGCTG
AACGATCGGG CCTACAACGC CATCCGGCGC CAGCGGGCCC GCACCGAGGC CGCCGGCCGG
GAGGTGTTCT GGAACCCGAA CACCGGCAAG CCCTTCATCG ATGAGCAGTC GCAGCGTCGC
GTCTGGCGCG CCGCCCTCCG GAAGGCGGGG GTGCGATACC GGGCGCCGAA GGAATGCCGC
GACACCAGCG TGACGCTCGC GCTGATGGCC GGGGCGAACC CGATGTGGGT GGCCCTGCAG
CATGGCCACA GCGTGCAGGT GATGATGCGG GACTATGCGA AGTGGATCCC GTCGGCCGAC
CGCGGGGCGA ATCGCGCCGC CGTGAACGCT GCGATTTCTG GCCCGGCGCA GGACCAGAAA
AAAGCGATTT AG
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| Protein sequence | MGRKASSGGV RPRGNRIEVR FTWEGKQVSP TLDLRPTAAN LKHAARLRAT IVEEINQGKF
RFAEHFPDYK NLTAVQPATD EESRLFRDWA KVWGRLSARG LEHSSHAVYL RHLAAYWLPV
FGHLPPERIT HVMVLERLAD LSAPRLDEKT GKTRRALARK TQNNILIPLR GVFELICKAR
TEVVDPTDGI DNQKVQKAMP DPFSPDEVEV ILRALEEQAG STWADYFEFS FFAGFRASEQ
IALLWEDVDH RSRTALVWRT RVLTKDKDRT KTNVERQVEL NDRAYNAIRR QRARTEAAGR
EVFWNPNTGK PFIDEQSQRR VWRAALRKAG VRYRAPKECR DTSVTLALMA GANPMWVALQ
HGHSVQVMMR DYAKWIPSAD RGANRAAVNA AISGPAQDQK KAI
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