| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2302 |
|---|
| Symbol | |
|---|
| ID | 4669127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2530377 |
|---|
| End bp | 2530910 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639823506 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_970653 |
|---|
| Protein GI | 120610975 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.708414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00337586 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACG ACGGATGCGC GCGGCGGGCC GTGCCGGAGA GTCGGCAGGG CGCCGGTGCC
CGTCCCAGGA GTGAAGCCCC CGTGACCACG CCCCGTTCCG TTTTCGTTCT CAACGGCCCC
AACCTGAACC TGCTGGGCAC CCGCGAGCCT GCCGTCTATG GCTCGCAGAC CCTCGCCGAC
GTGCAGCAGC TCTGCGAAAC CGCCTGCGCC CGCCACGGGC TGGCGCTGCA GTTCCGCCAG
AGCAACCACG AAGGCGACCT GGTGGACTGG ATCCACGAGG CCGGCCGCCT GCATGCCGCG
GGCCAGCTGG CCGGCGTGGT GCTGAACGCG GCGGCCTACA CCCATACCAG CGTGGCGCTG
CTCGACGCAG TGAAGGGTAC GGGGGTGCCG CTGGTCGAAC TGCACATCAG CAACGTGCAT
GCGCGGGAGA GCTTCCGTCA CCATTCCCAT ATCGCCGGCG CGGCACGCGC CGTGATGTGC
GGCTTCGGGG TGCCGGGCTA TGCCCTGGCG ATCGACGCGG TGGCCGGCTG GTGA
|
|---|
| Protein sequence | MKDDGCARRA VPESRQGAGA RPRSEAPVTT PRSVFVLNGP NLNLLGTREP AVYGSQTLAD
VQQLCETACA RHGLALQFRQ SNHEGDLVDW IHEAGRLHAA GQLAGVVLNA AAYTHTSVAL
LDAVKGTGVP LVELHISNVH ARESFRHHSH IAGAARAVMC GFGVPGYALA IDAVAGW
|
|---|
| |