| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2287 |
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| Symbol | |
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| ID | 4667510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2518640 |
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| End bp | 2519299 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639823492 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_970639 |
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| Protein GI | 120610961 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.368597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000248435 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGCCTG GCGACGGCCG GCGCAGACCC AGCCCGCGGC CCGGGGTGCG GCTCGAACCG
GTGGAACGGG CCGGGCCGTC CCGCCTGCTG CGCTTCCACA AGCCCTACGG CGTGCTGAGC
CAGTTCACGC CCGAGGGCCG CTGGCGCGGG CTGAAGGATT TCATCGACCT GCCGGGCGTG
TACGTGGCGG GCCGGCTGGA TGCCGACAGC GAGGGGCTGC TGCTGCTGAC CGACGACGGC
GGGCTGCAGG CGCGCATCGC CGATCCGCGC TTCAAGATGG AAAAGACCTA CTGGGTGCAG
GTGGAGGGCG TGCCGGATGC GGCGGCCCTG CAGGCGCTCG AGCGCGGGGT GCAGCTGAAC
GACGGCCCGA CGCTGCCGGC GCGCGCCCGG CGCCTGGATG TGCCGCCGCC CGTGGGCGAG
CGCGAGCCGC CGATCCGCGT GCGGCAGCAC ATTCCGGACA CCTGGATCGA GCTGGTGATC
CGCGAAGGCC GCAACCGGCA GGTGCGGCGC ATGACGGCGG CGGTGGGGCA TCCCACGCTG
CGGCTGGTGC GCGCGGCGAT CGGCCCCTTC GCGCTCGACG GGCTGGCACC CGGCACCTGG
GCAGAGGCGG AAATTCCCGC GGCCCTCGCG GTCCGGCGGC CCGGTACCCA CCGGATGTGA
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| Protein sequence | MRPGDGRRRP SPRPGVRLEP VERAGPSRLL RFHKPYGVLS QFTPEGRWRG LKDFIDLPGV
YVAGRLDADS EGLLLLTDDG GLQARIADPR FKMEKTYWVQ VEGVPDAAAL QALERGVQLN
DGPTLPARAR RLDVPPPVGE REPPIRVRQH IPDTWIELVI REGRNRQVRR MTAAVGHPTL
RLVRAAIGPF ALDGLAPGTW AEAEIPAALA VRRPGTHRM
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