Gene Aave_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2283 
Symbol 
ID4667340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2513074 
End bp2514444 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content72% 
IMG OID639823488 
Productextracellular solute-binding protein 
Protein accessionYP_970635 
Protein GI120610957 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0462772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000190717 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACTCCG CCACGGGCTG CGGCACTGCC GCTCATTTCC GCGCAGGTCG TCTGCCCGCG 
CGGGTTGCCG GATGGCTGGC CGGGCTGCTG CTGGCGGCCT GGGCCGCCGC GGCCGCGGGC
GCATCGCCCA TCAAGCCACG GGAAGCAGCC CGGCCCGCAC CGCGGGCGGC CGAGCCCACG
GCACTGCACA TCTGGCACTG CTGGGCCTCG CCCGGCGAGC ACCAGCGCAG CGAGGTGCTG
GCGCGGCACC TGGCGCGGCA CGGCCTGCAC TGGACGATCG AGGAGCCGGT GTGCGGCAAC
GGCAACAGCG CGCTGTCGGT GTTCACCCAG CGCTTCCAGC ATCGCCTGCC GCGCCCCGCC
GCGGTGATGA CGGCGGGCGA AGGCGCGCCG CCGCTGGCCG CCAAGGGCCT GCTGCTGCCG
CTGGACGCCA TCGCGCGGGA GCAGGAGTGG GAGGAAGTCG TGCCCTATGC CCTGCAGGAT
TGGGCGCGCT TCCGCGTCCA CTGGATCGCC GCGCCGCTGT TCGTGCATTC CACCAACCTG
CTGTGGTTCA ACAAGCCCCT GCTGGACCGC CTGGGCGGCA CCGTGCCCGA CACCTGGGAC
GAACTGCTGG AATTGCTCGG CCGCGCGCAG GCGGCGGGCA TCGTGCCGGT CGGGATCGGC
GCCGATGCGT GGGAATACTC GTTCTGGTTC GAGTCCGTGG CGGCCGGCGC GGGCGGCGCG
GAGTTCTACC GGCGGTTTTT CCTGGAGCAC GACCGGCGCG CGTACGACGA AGCCATCGTG
CGCCGCATCT TCGCGCGCAT GGCACAGCTG CGGCCCTACC TGCGCGCGAA CGCCGCTTCC
CGCGACTGGA GCAGCGCCAG CGACATGGTC GAAGAGGGCA AGGCGCTGCT GCAGATGCAG
GGCAGCTGGC TGAACGGCGA ATTGCGCCAG CGCGGGATGG AGGCCGGCCA GGACTACCTG
TGTCCGCGCT TTCCGGACAC GCAGGGCATG GTGCTCTACA TCGGCGACCA GGTCGGCTTC
GTGCGTGGCG CGCAGGTGGA CCCGGCCGCG CAGCGCGTCT TCATGCGCAT GGTGATGGAC
ACGGACTTCC AGCGCGAGAT GGGCATCGCC AGCGGCGCGG CGCCCGCGCG CGTGGACGTG
CCCGACACGG GGGCGGACCT GTGCGGCCGC CAGGCCATCC GGGACCTGCG CAGCGCGAAC
ATGCGCCGCA CGGTGCTCGC GGCCTTCTCT GCGCTGTCGC CGCGCTCGGT GCAGCAGCAC
ATCAACGATA TCGTCATGCA GCACCTGCAG GGCCGCATCG ACGACGCGCG CGCCACGCAA
CGGCTCAAGG ACCTGATCCT GGGCACCGGG CCGGTCGGGC CCGAGCGATG A
 
Protein sequence
MHSATGCGTA AHFRAGRLPA RVAGWLAGLL LAAWAAAAAG ASPIKPREAA RPAPRAAEPT 
ALHIWHCWAS PGEHQRSEVL ARHLARHGLH WTIEEPVCGN GNSALSVFTQ RFQHRLPRPA
AVMTAGEGAP PLAAKGLLLP LDAIAREQEW EEVVPYALQD WARFRVHWIA APLFVHSTNL
LWFNKPLLDR LGGTVPDTWD ELLELLGRAQ AAGIVPVGIG ADAWEYSFWF ESVAAGAGGA
EFYRRFFLEH DRRAYDEAIV RRIFARMAQL RPYLRANAAS RDWSSASDMV EEGKALLQMQ
GSWLNGELRQ RGMEAGQDYL CPRFPDTQGM VLYIGDQVGF VRGAQVDPAA QRVFMRMVMD
TDFQREMGIA SGAAPARVDV PDTGADLCGR QAIRDLRSAN MRRTVLAAFS ALSPRSVQQH
INDIVMQHLQ GRIDDARATQ RLKDLILGTG PVGPER