Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2283 |
Symbol | |
ID | 4667340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2513074 |
End bp | 2514444 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639823488 |
Product | extracellular solute-binding protein |
Protein accession | YP_970635 |
Protein GI | 120610957 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0462772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000190717 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACTCCG CCACGGGCTG CGGCACTGCC GCTCATTTCC GCGCAGGTCG TCTGCCCGCG CGGGTTGCCG GATGGCTGGC CGGGCTGCTG CTGGCGGCCT GGGCCGCCGC GGCCGCGGGC GCATCGCCCA TCAAGCCACG GGAAGCAGCC CGGCCCGCAC CGCGGGCGGC CGAGCCCACG GCACTGCACA TCTGGCACTG CTGGGCCTCG CCCGGCGAGC ACCAGCGCAG CGAGGTGCTG GCGCGGCACC TGGCGCGGCA CGGCCTGCAC TGGACGATCG AGGAGCCGGT GTGCGGCAAC GGCAACAGCG CGCTGTCGGT GTTCACCCAG CGCTTCCAGC ATCGCCTGCC GCGCCCCGCC GCGGTGATGA CGGCGGGCGA AGGCGCGCCG CCGCTGGCCG CCAAGGGCCT GCTGCTGCCG CTGGACGCCA TCGCGCGGGA GCAGGAGTGG GAGGAAGTCG TGCCCTATGC CCTGCAGGAT TGGGCGCGCT TCCGCGTCCA CTGGATCGCC GCGCCGCTGT TCGTGCATTC CACCAACCTG CTGTGGTTCA ACAAGCCCCT GCTGGACCGC CTGGGCGGCA CCGTGCCCGA CACCTGGGAC GAACTGCTGG AATTGCTCGG CCGCGCGCAG GCGGCGGGCA TCGTGCCGGT CGGGATCGGC GCCGATGCGT GGGAATACTC GTTCTGGTTC GAGTCCGTGG CGGCCGGCGC GGGCGGCGCG GAGTTCTACC GGCGGTTTTT CCTGGAGCAC GACCGGCGCG CGTACGACGA AGCCATCGTG CGCCGCATCT TCGCGCGCAT GGCACAGCTG CGGCCCTACC TGCGCGCGAA CGCCGCTTCC CGCGACTGGA GCAGCGCCAG CGACATGGTC GAAGAGGGCA AGGCGCTGCT GCAGATGCAG GGCAGCTGGC TGAACGGCGA ATTGCGCCAG CGCGGGATGG AGGCCGGCCA GGACTACCTG TGTCCGCGCT TTCCGGACAC GCAGGGCATG GTGCTCTACA TCGGCGACCA GGTCGGCTTC GTGCGTGGCG CGCAGGTGGA CCCGGCCGCG CAGCGCGTCT TCATGCGCAT GGTGATGGAC ACGGACTTCC AGCGCGAGAT GGGCATCGCC AGCGGCGCGG CGCCCGCGCG CGTGGACGTG CCCGACACGG GGGCGGACCT GTGCGGCCGC CAGGCCATCC GGGACCTGCG CAGCGCGAAC ATGCGCCGCA CGGTGCTCGC GGCCTTCTCT GCGCTGTCGC CGCGCTCGGT GCAGCAGCAC ATCAACGATA TCGTCATGCA GCACCTGCAG GGCCGCATCG ACGACGCGCG CGCCACGCAA CGGCTCAAGG ACCTGATCCT GGGCACCGGG CCGGTCGGGC CCGAGCGATG A
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Protein sequence | MHSATGCGTA AHFRAGRLPA RVAGWLAGLL LAAWAAAAAG ASPIKPREAA RPAPRAAEPT ALHIWHCWAS PGEHQRSEVL ARHLARHGLH WTIEEPVCGN GNSALSVFTQ RFQHRLPRPA AVMTAGEGAP PLAAKGLLLP LDAIAREQEW EEVVPYALQD WARFRVHWIA APLFVHSTNL LWFNKPLLDR LGGTVPDTWD ELLELLGRAQ AAGIVPVGIG ADAWEYSFWF ESVAAGAGGA EFYRRFFLEH DRRAYDEAIV RRIFARMAQL RPYLRANAAS RDWSSASDMV EEGKALLQMQ GSWLNGELRQ RGMEAGQDYL CPRFPDTQGM VLYIGDQVGF VRGAQVDPAA QRVFMRMVMD TDFQREMGIA SGAAPARVDV PDTGADLCGR QAIRDLRSAN MRRTVLAAFS ALSPRSVQQH INDIVMQHLQ GRIDDARATQ RLKDLILGTG PVGPER
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