Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2282 |
Symbol | |
ID | 4667330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2511219 |
End bp | 2512868 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639823487 |
Product | hypothetical protein |
Protein accession | YP_970634 |
Protein GI | 120610956 |
COG category | [S] Function unknown |
COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.349659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000222202 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGTCCT TCGTGAACGC CGCTGTTGCC CGTGCCGCGT CCCTGCGCGA TCCCGAAGAT CCCGGGCCCG GGTATCCCGC CGTCGGGCGC CGCCAATGGC TCGCCACCGC TGCCGTGGGG GTGTGCGGTG CCGCCGGGCT CACGCTGGCC GCACCGCCCG GGGCCTTCGC CGCCGAAAGC GATCGCGACG CGCCCCGCTC TCCCGCGGAG GGCGCGCGCC TGCTGGACCG GCTCACCTGG GGCGCCAACG CCGCGGCACT GGAGGGCCTG CAGCACGTCG GCCCGGCGGC CACCGTGGCG GCGCTGCTGC GCCCTGCCCC GAACGCCCCG CTGCCGCCCG AGGCGCAGGC GCAGATCGAC GCCATGGCCA TCACCCTCAC GCCGATGGAA ACCCTGGCCA TCGACATGCA GGCCCGCCAG CAGGCCATCA GGAACGAGCC GACCGAGGAG GCCCGCAAGG CCGCCCAGGC TGCCTACCAG CGCGACATGC GGGCGCTGCA GCGCGAGGCC GAGCGGCGCT TCGTGCTGCG GGCCGTGTAC TCCCCGGCGC AGCTGCAGGA GAAGATGACC TGGTTCTGGA TGAACCATTT CAACGTGTTC GCCGGCAAGG CGGACATCCG CGCCATGGTG GGCGACTACG AGGACCGCGC CATCCGCCCG CATGCGCTGG GGCGCTTCCG CGACCTGCTG GGCGCCACGG TGCGGCATCC GGCCATGCTG CGCTACCTGG ACAACGCGCA GAATGCCGCC CGCCGCATCA ACGAGAACTA CGCGCGCGAG TTGATGGAGC TGCACACGCT GGGCGTGGAC GGCGGATACA GCCAGCGCGA CGTGCAGGAG ATGGCGCGCG TGCTCACCGG CCACGGCGTG TCGCTGCGCC CGCTGGACGA GCCGCCACCG AAGCTCAAGC CCGAATGGGC ACGCCAGTAC GTGCGCCGCG GCCTGTACGA GTTCCATCCG CAGCGCCACG ACTGGGACCC GAAGGAACTG CTCGGCCAGC CGCTGCAGGG CCAGGGCATG GCGGAGCTGG ACGAGGCGCT GGACCGGCTC GCCCGCGCGC CGGCCACCGC CCGCTTCGTG ACCCGCAAGA TGGCCGCCTA CCTGGTGGGC GATGCACCGC CGCCCGCGCT GCTGCAGGCG ATGGCCGAGC GCTTCCAGCA GACCGACGGC CACATCGGCG CGGTGCTGCA GACGCTGTTC ACAAGCGAGG CGTTCCAGGC CTCGCTCGGC ACCCGGCTGC GCGACCCCGT GCAGTACGTG ATGGCCGGCC TGCGCCTGGG CTACTCCGAC CGCGTGCTGG CCAACCCCGA TCCGGCGCTC TCGTGGCTGC AGCGCCTGGC CGAGCCGCTC TACGGCCGCG TCACGCCGGA CGGCTATCCG CTGGACGCGG CCGCCTGGAC CAGCTCCGGC CAGATGGCCG TGCGCTTCGA GATCGCGCGG GCGCTGGGCG GGGCCGGGAC CGGCGCGCTC TACCGCGCCG AGGGGGCGCC GCCGCCGAAG GTGCGGCCCC CCGCGATCGC GCAGAACGCC GCCTTCCGCG CCATGGAGCC GCAACTGGCG CCGGCCACGC GCGTGGCGCT GGCGCGTGCC GGCTCGCCCG CGGAATGGAA CACTTTCTTG CTGTCCGCCC CCGAATTCAT GTACGCCTGA
|
Protein sequence | MLSFVNAAVA RAASLRDPED PGPGYPAVGR RQWLATAAVG VCGAAGLTLA APPGAFAAES DRDAPRSPAE GARLLDRLTW GANAAALEGL QHVGPAATVA ALLRPAPNAP LPPEAQAQID AMAITLTPME TLAIDMQARQ QAIRNEPTEE ARKAAQAAYQ RDMRALQREA ERRFVLRAVY SPAQLQEKMT WFWMNHFNVF AGKADIRAMV GDYEDRAIRP HALGRFRDLL GATVRHPAML RYLDNAQNAA RRINENYARE LMELHTLGVD GGYSQRDVQE MARVLTGHGV SLRPLDEPPP KLKPEWARQY VRRGLYEFHP QRHDWDPKEL LGQPLQGQGM AELDEALDRL ARAPATARFV TRKMAAYLVG DAPPPALLQA MAERFQQTDG HIGAVLQTLF TSEAFQASLG TRLRDPVQYV MAGLRLGYSD RVLANPDPAL SWLQRLAEPL YGRVTPDGYP LDAAAWTSSG QMAVRFEIAR ALGGAGTGAL YRAEGAPPPK VRPPAIAQNA AFRAMEPQLA PATRVALARA GSPAEWNTFL LSAPEFMYA
|
| |