Gene Aave_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2263 
Symbol 
ID4665397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2493721 
End bp2495439 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content72% 
IMG OID639823468 
Productthiamine pyrophosphate protein 
Protein accessionYP_970615 
Protein GI120610937 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000136096 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000016429 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCAAATA TTAAAGCTCT TAGTTCACTT AAGCGGTCAA GACCAGAATT GGCACGCACC 
GGCGGCCAGA TCCTCGTGGA CCAGCTCATC CTGCACGGCG TGCGCCAGCT CTTCTGCGTG
CCCGGCGAAA GCTACCTGGC GGTGCTGGAC GCGCTGCACG ATGCCGACAT CGCCGTCACC
GTCTGCCGGC AGGAAGGCGG CGCGGCCATG ATGGCCGAGG CGCAGGGCAA GCTCACGGGC
CGGCCGGGCA TCTGCTTCGT CACGCGCGGC CCGGGGGCCA CGAATGCCTC GGCCGGCATC
CATATCGCGC ACCAGGATTC GACGCCGCTG ATCGTCTTCG TGGGCCAGGT GGCCCGCGAG
GCGCTGGGCC GCGAGGCCTT CCAGGAGCTG GACTATGGCG CCGTGTTCGG CACCATGGCC
AAGTGGGTGG TGCAGGTGGA CGATGCGCGG CGCCTGCCGG AGCTGCTGTC GCGGGCGTTC
CACGTGGCCA CCTCGGGCCG GCCCGGGCCG GTGGTGGTGG CGCTGCCGGA AGACATGCTG
ACCGATGCCG TGCAGGCCGC CGACGCCCTG CCCCACGCGG TGGCCGAGAC GCACCCCGGC
CCAGTTGCAC TGCGCGAGCT GGCCCGGCGG CTGGCCTCGG CCGAGCGGCC GGTGGCCATC
CTGGGCGGCA GCCGCTGGAC GGAGGAGGCC GTGCGCGATT TCACGGCCTT CGCCGAGGCG
TGGAGCCTGC CGGTGTGCTG CTCGTTTCGC CGGCAGATGC TGTTTCCGGC CAGCCACCGC
TGCTACGGCG GCGACCTGGG CCTGGGCGCC AATCCGGAGC TGCTGGCGCG CATCCGCGAA
AGCGACCTGG TGCTGCTGGT GGGCGGACGG CTGTCGGAAG TGCCTTCACA GGGCTACACG
CTGCTGGACA TTCCCGTGCC GGCGCAGCCC CTGGTCCACG TGCATGCGGA TGCCGACGAA
CTCGGCCGGC TGTACCGCCC GGCGCAGGCC ATCCATGCCA CGCCGCAGGC TTTCACGGCC
GCCCTGGCCG CGGTGCGGCC GGAAGGCCCG GTGCGCTGGG CCGCGCATGC CGCCGCGGCG
CGCGCCGATT ACCTGGCCTG GAGCGATCCC GCGCCGATCC GCATTCCGGG CCCGCTGCAG
ATGGGCGAGG TGATGCGCCA CCTGCGCGAG GTGCTGCCGC CGGACACCAT CTTCTGCAAC
GGCGCGGGCA ACTTCGCCAC CTGGGTGCAC CGGTTCTGGC CCTTCACGGC CTTCGCCAGC
CAGCTCGCGC CCACCAGCGG CTCCATGGGC TACGGCCTGC CGGCCGGCGT GGGCGCCAAG
CGGCTGTGGC CGCAGCGCGA GGTGGTGGTG TTCTCGGGCG ACGGCGACTT CCTCATGCAC
GGGCAGGAGT TCGCCACCGC CGTGCAGTAC GGCCTGCCGG TGATCGTGGT GCTGCTGGAC
AACGGCATGT ACGGCACGAT CCGCATGCAC CAGGAGCGCG AGTACCCGGG GCGCGTGAGC
GCCACGCAAC TGCGCAACCC CGACTTCCGC GCCTACGCGC AGGCCTTCGG CGGGCACGGA
GAGCGGGTGG AGCGGACGGA GGATTTCGCG CCCGCGCTGG CCCGCGCCCG CGCGAGCGGC
CTGCCCAGCG TGCTGCACTG CCTGCTGGAC GCGGAGGCGA TCACGCCCAC GGGTACGCTG
GCGGGCATCC GCGGCGCGGC GCAGGCGGCC GGCCGCTGA
 
Protein sequence
MPNIKALSSL KRSRPELART GGQILVDQLI LHGVRQLFCV PGESYLAVLD ALHDADIAVT 
VCRQEGGAAM MAEAQGKLTG RPGICFVTRG PGATNASAGI HIAHQDSTPL IVFVGQVARE
ALGREAFQEL DYGAVFGTMA KWVVQVDDAR RLPELLSRAF HVATSGRPGP VVVALPEDML
TDAVQAADAL PHAVAETHPG PVALRELARR LASAERPVAI LGGSRWTEEA VRDFTAFAEA
WSLPVCCSFR RQMLFPASHR CYGGDLGLGA NPELLARIRE SDLVLLVGGR LSEVPSQGYT
LLDIPVPAQP LVHVHADADE LGRLYRPAQA IHATPQAFTA ALAAVRPEGP VRWAAHAAAA
RADYLAWSDP APIRIPGPLQ MGEVMRHLRE VLPPDTIFCN GAGNFATWVH RFWPFTAFAS
QLAPTSGSMG YGLPAGVGAK RLWPQREVVV FSGDGDFLMH GQEFATAVQY GLPVIVVLLD
NGMYGTIRMH QEREYPGRVS ATQLRNPDFR AYAQAFGGHG ERVERTEDFA PALARARASG
LPSVLHCLLD AEAITPTGTL AGIRGAAQAA GR