Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2250 |
Symbol | |
ID | 4665530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2474330 |
End bp | 2475385 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639823455 |
Product | inner-membrane translocator |
Protein accession | YP_970602 |
Protein GI | 120610924 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.170766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000363986 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAAC TCAAGCCCAG TCCCCTCTCC CCCGCGGCGC TGCTGCGCCA CCGCCTCGCC TGGCCGGTGA TCACGCTGCT GCTCCTGCTG GCGATCAACG CGGCCTTCAA CCCGGGTTTC CTGCACATCG AATGGCGCGA CGGGCATTTC TACGGCAGCC TGATCGACAT CCTCAACCGC GCCGCGCCCC TGGTGCTGGT GTCGCTGGGC ATGACCCTGG TGATCGCCAC GCGCGGCATC GACATCTCGG TGGGTGCCAC GGTGGCCATC GCCGCGGCCG TGGCCGCCTG GCTGATCGGC GGATCGGTGT CGGCCAACGA AAGCCGCTTT CCGCTGCCGG TGGCCATCCT GGGCGCACTG GGTGTCGCGC TGCTGTGCGG CGTCTGGAAC GGCGTGCTGG TGGCCAGGGT GGGCATGCAG CCCATCATCG CCACGCTGAT CCTGATGGTG GCGGGCCGGG GCATCGCCCA GCTCATCACC GACGGGCAGA TCATCACCAT CTACTACACC CCCTACTTCT TCATCGGCGG GGGCTATCTG GCCGGGCTGC CGTTCTCGCT CTTCGTGGCG GCGGCGGTGT TCGCCGTACT CCACCTCGCC ATCACGCGCA CGGCGCTGGG CCTGTTCATC CAGGCCGTGG GCGTCAATCC CACGGCGGCG CGGGTGGCCG GCGTGCAGGC GGGGCGGCTC ATCATGGCGG CCTACGTGTT CTGCGGCGCG TGCGCGGGCA TCGCGGGCCT GCTCATCAGC TCCAACGTGA AGAGCGCGGA CGGCAACAAC GCCGGCCAGC TGATGGAGCT GGACGCCATC CTGGCCGTGA CGCTCGGCGG CACGGCGCTC ACCGGCGGGC GCTTCAGCCT CGCGGGCAGC GTGATCGGCG CGCTCATCAT CCAGACGCTG ACCTACGCCA TCTATTCGCT GGGCGTGCCG CCCGAGGTGA ACCTCGTGGT GAAGGCGGTG GTGGTGTTCG TCGTCATGCT GCTGCAGTCG CCCGAGTTCC GCGCCCAGGT GGGCCTGCTC GCGCGCCGCC CCGCCGCCGG GAGGGCCCTG CCATGA
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Protein sequence | MAELKPSPLS PAALLRHRLA WPVITLLLLL AINAAFNPGF LHIEWRDGHF YGSLIDILNR AAPLVLVSLG MTLVIATRGI DISVGATVAI AAAVAAWLIG GSVSANESRF PLPVAILGAL GVALLCGVWN GVLVARVGMQ PIIATLILMV AGRGIAQLIT DGQIITIYYT PYFFIGGGYL AGLPFSLFVA AAVFAVLHLA ITRTALGLFI QAVGVNPTAA RVAGVQAGRL IMAAYVFCGA CAGIAGLLIS SNVKSADGNN AGQLMELDAI LAVTLGGTAL TGGRFSLAGS VIGALIIQTL TYAIYSLGVP PEVNLVVKAV VVFVVMLLQS PEFRAQVGLL ARRPAAGRAL P
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