Gene Aave_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2250 
Symbol 
ID4665530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2474330 
End bp2475385 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID639823455 
Productinner-membrane translocator 
Protein accessionYP_970602 
Protein GI120610924 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.170766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000363986 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGAAC TCAAGCCCAG TCCCCTCTCC CCCGCGGCGC TGCTGCGCCA CCGCCTCGCC 
TGGCCGGTGA TCACGCTGCT GCTCCTGCTG GCGATCAACG CGGCCTTCAA CCCGGGTTTC
CTGCACATCG AATGGCGCGA CGGGCATTTC TACGGCAGCC TGATCGACAT CCTCAACCGC
GCCGCGCCCC TGGTGCTGGT GTCGCTGGGC ATGACCCTGG TGATCGCCAC GCGCGGCATC
GACATCTCGG TGGGTGCCAC GGTGGCCATC GCCGCGGCCG TGGCCGCCTG GCTGATCGGC
GGATCGGTGT CGGCCAACGA AAGCCGCTTT CCGCTGCCGG TGGCCATCCT GGGCGCACTG
GGTGTCGCGC TGCTGTGCGG CGTCTGGAAC GGCGTGCTGG TGGCCAGGGT GGGCATGCAG
CCCATCATCG CCACGCTGAT CCTGATGGTG GCGGGCCGGG GCATCGCCCA GCTCATCACC
GACGGGCAGA TCATCACCAT CTACTACACC CCCTACTTCT TCATCGGCGG GGGCTATCTG
GCCGGGCTGC CGTTCTCGCT CTTCGTGGCG GCGGCGGTGT TCGCCGTACT CCACCTCGCC
ATCACGCGCA CGGCGCTGGG CCTGTTCATC CAGGCCGTGG GCGTCAATCC CACGGCGGCG
CGGGTGGCCG GCGTGCAGGC GGGGCGGCTC ATCATGGCGG CCTACGTGTT CTGCGGCGCG
TGCGCGGGCA TCGCGGGCCT GCTCATCAGC TCCAACGTGA AGAGCGCGGA CGGCAACAAC
GCCGGCCAGC TGATGGAGCT GGACGCCATC CTGGCCGTGA CGCTCGGCGG CACGGCGCTC
ACCGGCGGGC GCTTCAGCCT CGCGGGCAGC GTGATCGGCG CGCTCATCAT CCAGACGCTG
ACCTACGCCA TCTATTCGCT GGGCGTGCCG CCCGAGGTGA ACCTCGTGGT GAAGGCGGTG
GTGGTGTTCG TCGTCATGCT GCTGCAGTCG CCCGAGTTCC GCGCCCAGGT GGGCCTGCTC
GCGCGCCGCC CCGCCGCCGG GAGGGCCCTG CCATGA
 
Protein sequence
MAELKPSPLS PAALLRHRLA WPVITLLLLL AINAAFNPGF LHIEWRDGHF YGSLIDILNR 
AAPLVLVSLG MTLVIATRGI DISVGATVAI AAAVAAWLIG GSVSANESRF PLPVAILGAL
GVALLCGVWN GVLVARVGMQ PIIATLILMV AGRGIAQLIT DGQIITIYYT PYFFIGGGYL
AGLPFSLFVA AAVFAVLHLA ITRTALGLFI QAVGVNPTAA RVAGVQAGRL IMAAYVFCGA
CAGIAGLLIS SNVKSADGNN AGQLMELDAI LAVTLGGTAL TGGRFSLAGS VIGALIIQTL
TYAIYSLGVP PEVNLVVKAV VVFVVMLLQS PEFRAQVGLL ARRPAAGRAL P