| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2249 |
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| Symbol | |
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| ID | 4665143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2473317 |
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| End bp | 2474333 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639823454 |
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| Product | inner membrane ABC transporter permease protein YjfF |
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| Protein accession | YP_970601 |
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| Protein GI | 120610923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0318239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000380774 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCG TCATGACCCC GGCCGCGGCC ACGGCGCCCG CCACGCGCGG CCCGCGCCTG
AACGCCAGGT ACCTGCCGCT GGCCGCCACC ATCGCGCTCT TCGTGGCCAT GGCCACGCTC
GGCTCGGTGC GCTACACGGG CTTTTTCTCG GCCCAGGTGT TCCTCAACCT GCTGATCGAC
AACGCCTTCC TCATCATCGT CGCCGTGGGC ATGACCTTCG TCATCCTCTC GGGCGGCATC
GACCTGTCGG TGGGCGCCGT GGTCGCGCTG ACCACCATGG TGTTCGCGTC GCTGGTGGAG
CGCCACGGCT GGAGTCCCGC GGCGGCCGTG CCCGTGGTGC TGCTGATGGG CACCTGCTTC
GGCGCGTTCA TGGGCTTCCT GATCGAGCGC TTCCGGCTGC AGCCCTTCAT CGTGACGCTG
GCCGGCATGT TCCTCGCGCG GGGCCTGTGC TACCTCATCA GCATCGACTC GATCAGCATC
ACGCACGAAG GCTATTCGGA ACTCGCGCAG TGGCGCCTGC AGCTGTCCGA AACCGCCTCG
ATCTCGCCGG GTGCGCTGAT CGCCATCGCC GTGGTGCTGG CCGGCGTCTT CATCGCGCAC
TGCACGCCGT TCGGCCGCGC GGTCTATGCC GTGGGCGGCA GCGAGCACTC GGCCGTGCTG
ATGGGCCTGC CCGTGCGCTC CACGCTGGTG GGGGTCTATA CGCTTTCGGG CTTCTGCTCG
GCACTGGCCG GCGTGGTGTT CACCTTCTAC ATGCTCTCGG GCTACGGGCT GCACGCCGTG
GGCATGGAGC TGGACGCCAT CGCCGCCGTC GTCATCGGCG GCACCCTGCT CACGGGCGGC
GTGGGCTACG TGGCCGGCAC GCTCTTCGGC GTGCTGATGC TCGGAATCAT CCAGACGCTC
ATCTCCTTCG ACGGCACGCT CAGTTCGTGG TGGACGCGCA TCGCCGTCGG CGTGCTGCTG
TTCGTCTTCT GCCTGCTGCA ACGCCTGCTC ACGCGCCGCT CCGGCCGGCG GCGCTGA
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| Protein sequence | MSAVMTPAAA TAPATRGPRL NARYLPLAAT IALFVAMATL GSVRYTGFFS AQVFLNLLID
NAFLIIVAVG MTFVILSGGI DLSVGAVVAL TTMVFASLVE RHGWSPAAAV PVVLLMGTCF
GAFMGFLIER FRLQPFIVTL AGMFLARGLC YLISIDSISI THEGYSELAQ WRLQLSETAS
ISPGALIAIA VVLAGVFIAH CTPFGRAVYA VGGSEHSAVL MGLPVRSTLV GVYTLSGFCS
ALAGVVFTFY MLSGYGLHAV GMELDAIAAV VIGGTLLTGG VGYVAGTLFG VLMLGIIQTL
ISFDGTLSSW WTRIAVGVLL FVFCLLQRLL TRRSGRRR
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