Gene Aave_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2248 
Symbol 
ID4665584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2471530 
End bp2473263 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content69% 
IMG OID639823453 
Productdihydroxy-acid dehydratase 
Protein accessionYP_970600 
Protein GI120610922 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR00110] dihydroxy-acid dehydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0766629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000565085 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCC CTCCGCGCAA ACTCCGCTCC ACCGAATGGT TCGGCACGGC CGACAAGAAC 
GGCTTCATGT ACCGCAGCTG GATGAAGAAC CAGGGCATCC CCGACCATGA GTTCGACGGC
CGCCCGATCA TCGGCATCTG CAACACCTGG TCCGAACTCA CGCCCTGCAA CGCGCACTTC
CGCAAGATCG CCGAGCACGT CAAGCGCGGC ATCTACGAAG CGGGCGGCTT CCCGGTCGAA
TTCCCCGTGT TCTCCAACGG CGAATCCAAC CTGCGCCCCA CCGCCATGCT CACGCGCAAC
CTGGCCAGCA TGGATGTGGA AGAAGCCATC CGCGGCAACC CGATCGACGC CGTCGTGCTG
CTCACGGGCT GCGACAAGAC CACGCCCGCG CTGCTGATGG GCGCGGCCAG CTGCGACGTG
CCGGCCATCG TGGTCACGGG CGGGCCCATG CTCAACGGCA AGCTGGCCGG CAAGGACATC
GGCTCGGGCA CGGCCGTGTG GCAGCTGCAC GAATCCCTGA AGGCGGGCGA GATCGAGCTG
CACCAGTTCC TCGCGGCCGA AGGCGGCATG TCGCGCTCGG CCGGCACCTG CAACACCATG
GGCACGGCCA GCACCATGGC CTGCATGGCC GAATCGCTGG GCACCTCGCT GCCGCACAAC
GCCGCGATTC CCGCGGTGGA CGCGCGCCGC TACGTGCTGG CGCACATGTC CGGCAAGCGC
ATCGTCGAGA TGGCGCACGA AGGGCTCACG CTCTCGAAGA TCCTGACGCG CGAAGCCTTC
GAGAACGCCA TCCGCACCAA CGCCGCCATC GGCGGCTCGA CCAATGCCGT CATCCACCTG
AAGGCGATCG CCGGCCGCAT CGGCGTGCAG CTCGACCTGG AGGACTGGAC CCGCATCGGG
CGTGGCACGC CCACGCTGGT GGACCTGCAG CCCTCGGGCC GCTTCCTGAT GGAGGAGTTC
TACTACGCGG GCGGCCTGCC CGCCGTGCTG CGCCGCCTGG GCGAGAACGG CCTGCTGCCC
CACCCCGACG CGCTCACCGT GAACGGCAGG AGCCTGTGGG ACAACGTGCG CGACGCGCCC
CAGTACAACG ACGAGGTGAT CCGCCCGCTG GACAACCCGC TGATCGCGGA TGGCGGCATC
TGCATCCTGC GCGGCAACCT GGCGCCGCGC GGCGCGGTGC TCAAGCCTTC GGCCGCCACG
CCCGAGCTGC TCCGGCACCG GGGCCGCGCC GTGGTGTTCG AGAACCTGGA GCATTACAAG
GAGCGCATCG TCGATGAGGA CCTGGACATC GACGCCAGCT GCGTGATGGT CATGAAGAAC
TGCGGCCCCA AGGGCTACCC CGGCATGGCC GAGGTGGGCA ACATGGGCCT GCCGCCCAAG
CTGCTGCGGC AGGGCGTGAA GGACATGGTC CGCATCTCCG ACGCGCGCAT GAGCGGCACC
GCCTACGGCA CCGTGGTGCT GCACGTGGCG CCCGAGGCCG CGGCCGGCGG GCCGCTGGCC
GCCGTGCGCG ACGGCGACTT CATCGAGCTG GACTGCGAAC AGGGGCGCCT GCACCTGGAC
ATCAGCGACG AGGAACTGGC CGCGCGCCTG GCCGAACTGG CCGCCACCGA CCATGGCGGC
CGCGGCGGGT ACCAGCGCCT GTACGTCGAT CACGTGCTGC AGGCCGACGA AGGCTGCGAC
TTCGATTTCC TGGTGGGGTG CCGTGGCGCG GCGGTTCCGC GCCACTCGCA TTGA
 
Protein sequence
MTTPPRKLRS TEWFGTADKN GFMYRSWMKN QGIPDHEFDG RPIIGICNTW SELTPCNAHF 
RKIAEHVKRG IYEAGGFPVE FPVFSNGESN LRPTAMLTRN LASMDVEEAI RGNPIDAVVL
LTGCDKTTPA LLMGAASCDV PAIVVTGGPM LNGKLAGKDI GSGTAVWQLH ESLKAGEIEL
HQFLAAEGGM SRSAGTCNTM GTASTMACMA ESLGTSLPHN AAIPAVDARR YVLAHMSGKR
IVEMAHEGLT LSKILTREAF ENAIRTNAAI GGSTNAVIHL KAIAGRIGVQ LDLEDWTRIG
RGTPTLVDLQ PSGRFLMEEF YYAGGLPAVL RRLGENGLLP HPDALTVNGR SLWDNVRDAP
QYNDEVIRPL DNPLIADGGI CILRGNLAPR GAVLKPSAAT PELLRHRGRA VVFENLEHYK
ERIVDEDLDI DASCVMVMKN CGPKGYPGMA EVGNMGLPPK LLRQGVKDMV RISDARMSGT
AYGTVVLHVA PEAAAGGPLA AVRDGDFIEL DCEQGRLHLD ISDEELAARL AELAATDHGG
RGGYQRLYVD HVLQADEGCD FDFLVGCRGA AVPRHSH