| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2229 |
|---|
| Symbol | |
|---|
| ID | 4667304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2449501 |
|---|
| End bp | 2450685 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639823434 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_970581 |
|---|
| Protein GI | 120610903 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.346154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00140228 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCT CCCGGCGCGC CGAGCGCATC GAACCCTTTT ACGTGATGGA GATCGCCAAG
GCCGCGCAGG CCCTGGCCCG CGAGGTGGCC GGCGGCCCGG AACCGATGAT CTTCCTGAAC
ATCGGCGAGC CCGACTTCAC CGCGCCGCCG CTGGTGCGCG AGGCCGCCGA CCGCGCCCTG
CGCAGCGGCG CCACCCAGTA CACCAATGCC CTCGGCCTGG AAGCGCTGCG CGAACGCATC
AGCGGCTGGT ACGCCGAACG CTTCGGCGTG GCGGTGCCGG CGCGCCGCAT CGTGGTCACG
GCGGGCGCCT CCGGCGCCCT GCAACTCGCC TGCCTGGCGC TCATCGAGCA GGGGGACGAG
GTCCTCATGC CGGACCCGAG CTATCCGTGC AACCGCCATT TCGTGAGCGC GGCGGACGGC
CGCGCGGTGC TCGTCCCCTC CACCGCCGAA GAGCGCTTCC AGCTCAGCGC CGACAAGGTC
GCCGCGCACT GGGGCCCGAA GACGCGCGGC GTGCTGCTGG CCTCGCCCTC CAACCCCACG
GGCACCTCGA TCGCGCCCGG CGAACTGCGC CGCATCCATG CCGCCGTGCA GGCGCGCGGC
GGCTTCACCC TCATCGACGA GATCTACCTC GGCCTCTCCT ACGAAGAGGC CTTCGGGCAC
ACGGCGCTCG CGATCGGCGA GGACATCGTC AGCATCAACA GCTTCAGCAA ATACTTCAAC
ATGACGGGCT GGCGCCTGGG CTGGATGGTC GTGCCCGAGG CCATGGTCCC GGTCGTGGAG
CGGCTGGCGC AGAACCTCTT CATCTGCCCG AGCACGGTGG CGCAGCATGC CGCGCTGGCC
TGCTTCGAGC CGGACAGCAT CGCCGAGTAC GAACGCCGCC GCGCCGAGTT CAAGGCCCGC
CGCGACTACT TCATCCCCGC GCTCGAATCC CTGGGCCTGT CCGTGCCCGT GCGGCCGGAC
GGCGCCTTCT ACGCCTGGGC CGACTGCACC ACCGCCGCCC GGCGCCTGGG CGTGGAGGGC
AGCTGGAACT TCGCCCACGA GGTGATGCGC CGCGCCCACC TGGCCCTCAC GCCGGGGCGC
GACTTCGGCA GCCACGCCCC CGAGGCCTTC GTGCGCTTTT CCACGGCCAA CTCCATGGCG
CAGCTGCAGG AAGCCGTGGC ACGGCTGTCC CGGCTGCTGG CCTGA
|
|---|
| Protein sequence | MKFSRRAERI EPFYVMEIAK AAQALAREVA GGPEPMIFLN IGEPDFTAPP LVREAADRAL
RSGATQYTNA LGLEALRERI SGWYAERFGV AVPARRIVVT AGASGALQLA CLALIEQGDE
VLMPDPSYPC NRHFVSAADG RAVLVPSTAE ERFQLSADKV AAHWGPKTRG VLLASPSNPT
GTSIAPGELR RIHAAVQARG GFTLIDEIYL GLSYEEAFGH TALAIGEDIV SINSFSKYFN
MTGWRLGWMV VPEAMVPVVE RLAQNLFICP STVAQHAALA CFEPDSIAEY ERRRAEFKAR
RDYFIPALES LGLSVPVRPD GAFYAWADCT TAARRLGVEG SWNFAHEVMR RAHLALTPGR
DFGSHAPEAF VRFSTANSMA QLQEAVARLS RLLA
|
|---|
| |