Gene Aave_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2226 
Symbol 
ID4667332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2447902 
End bp2448327 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID639823431 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_970578 
Protein GI120610900 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.267348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000328891 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCACCA TGGCCTCGCG CGGCGGCAGC CGCCGCCGCT CGATGAACGA GATCAACATG 
GTCCCCTTCA TCGACGTGAT GCTGGTGCTG CTCATCATCT TCATGGTGAC CGCGCCCATG
CTCACCCCCA GCCGGATCGA CGTGCCCACC GTCGGCAAGG GCGCCAAGGC GCCCAAGGCC
TTCGGCCAGG TCATCATCCA CAAGGACGGC AGCCTGCAGC TCAAGACGGG CGACCTCGAA
CGCCCCGTGA CACTCAAGGA ACTCGGCGCC ACCGCCAAGG CCTGGCAGGC CACGCAGGAA
GAAGGCACGC CGGTGCTGGT CACCGCCGAC CGGAACGTGA CCTACGACTC CGTGGTCAAG
GCCATGGACG CGCTGCAGCG CGCGGGCGTG CAGCGCGTGG GCCTCACCGT CAAGTCGGGC
GGCTGA
 
Protein sequence
MPTMASRGGS RRRSMNEINM VPFIDVMLVL LIIFMVTAPM LTPSRIDVPT VGKGAKAPKA 
FGQVIIHKDG SLQLKTGDLE RPVTLKELGA TAKAWQATQE EGTPVLVTAD RNVTYDSVVK
AMDALQRAGV QRVGLTVKSG G