Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2226 |
Symbol | |
ID | 4667332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2447902 |
End bp | 2448327 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639823431 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_970578 |
Protein GI | 120610900 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.267348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000328891 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCACCA TGGCCTCGCG CGGCGGCAGC CGCCGCCGCT CGATGAACGA GATCAACATG GTCCCCTTCA TCGACGTGAT GCTGGTGCTG CTCATCATCT TCATGGTGAC CGCGCCCATG CTCACCCCCA GCCGGATCGA CGTGCCCACC GTCGGCAAGG GCGCCAAGGC GCCCAAGGCC TTCGGCCAGG TCATCATCCA CAAGGACGGC AGCCTGCAGC TCAAGACGGG CGACCTCGAA CGCCCCGTGA CACTCAAGGA ACTCGGCGCC ACCGCCAAGG CCTGGCAGGC CACGCAGGAA GAAGGCACGC CGGTGCTGGT CACCGCCGAC CGGAACGTGA CCTACGACTC CGTGGTCAAG GCCATGGACG CGCTGCAGCG CGCGGGCGTG CAGCGCGTGG GCCTCACCGT CAAGTCGGGC GGCTGA
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Protein sequence | MPTMASRGGS RRRSMNEINM VPFIDVMLVL LIIFMVTAPM LTPSRIDVPT VGKGAKAPKA FGQVIIHKDG SLQLKTGDLE RPVTLKELGA TAKAWQATQE EGTPVLVTAD RNVTYDSVVK AMDALQRAGV QRVGLTVKSG G
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