| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2224 |
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| Symbol | |
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| ID | 4667331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2445306 |
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| End bp | 2446640 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639823429 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_970576 |
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| Protein GI | 120610898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.199134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000423669 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGGGC TTGCTGCTTC CGCCTATCCC TCCGGGAGTT TCCATCACGA GGAATCCCTG
TCCCATGCGG ACACCCATGA AGAAGCCACG CCCAGCGAGA TCGCGGTCGG CGTGATCATC
GGGCGTTCGT CCGAGTATTT CGACTTCTTC GTCTTCGGCA TCGCCTGCGT GCTGGTGTTC
CCGTCGTTCG TCTTTCCCTT CATGACGCGC CTGGACGGCA CGCTGATGGC CTTCGCGATC
TTCGCGCTCG CCTTCGTCGC CCGTCCCGTG GGGACCGCCA TCTCGATGGC GGTGCAGCGG
CGCTGGGGGC GCGGCACCAA GCTGACGCTC GCCCTGTTCC TGCTGGGCGC CTCCACGGCG
GGCATGGCGT TCCTGCCGAG CTACAACAGC GTGGGCCACA TCGCCATCAT CGCCCTGGTC
GTGCTGCGCC TGGGCCAGGG GGTGGCGCTG GGCGGTACCT GGGACGGCCT TCCCTCGCTG
CTGGCCATGT CCGCCCCGCC GGAGCGGCGT GGCTGGTACG CCATGATCGG GCAACTGGGC
GCGCCGGTCG GCTTCGCGCT CGCGGCCAGC CTGTTCGCCT ATCTCTACTC CAACCTGTCG
GTGCAGGAGT TCCTCGACTG GGGCTGGCGC TTTCCGTTCT TCGTCGCCTT CGCGATCAAC
GTGGTGGCGC TTTTCGCCCG CCTGCGCCTG ATCGTCGGCC AGTCCTATAC CGAGATGATG
CAGCAGCGCG AGCTGGAGCC CGTGGGTGCG CTGGAACTCA TGCGCAGCGA AGGCCGCAAC
GTGGTGCTGG GCGCCTTCGC CGCGCTGGCG AGCTTCGCGC TCTTCCACGT GGTCACGGTG
TTCCCGCTGT CGTGGATCTC GATGTATTCC GAGCAGTCGA TCACCCACGT GCTGGGCGTG
CAGATCGCCG GTGCCTTCTG CGCGGCCGTC GCCATCGCCA TCTCCGGCCG CCTGGCCGAC
CGGGTGGGCC GCCGCAACAC GCTGGGCGCC ATGGCCTGCC TGATCGGGGT GTTCAGCCTG
GTCACGCCGT GGCTGCTCAG CAGCGGCACG GTAGGCAACA ACATCTTCAT CCTGGTGGGC
TTCGTGCTGC TGGGCCTGTC GTACGGTCAG GCTTCCGGCA CGGTGACGGC CAATTTCTCG
CCGCGCTTCC GCTACACGGG GGCCGCGCTG TCGGCCGATC TCGCCTGGCT GGTCGGCGCC
GCGTTCGCGC CGCTGGTCGC CCTGGGCCTT TCGGCCAAGT TCGGGCTGAT CGCTGTGAGC
GTGTACCTGC TGTCCGGCGT GGTCTGCACG CTGCTGGCGC TGCGGATCAA CCGCCTGATC
GAGCGCCGCG AATGA
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| Protein sequence | MSGLAASAYP SGSFHHEESL SHADTHEEAT PSEIAVGVII GRSSEYFDFF VFGIACVLVF
PSFVFPFMTR LDGTLMAFAI FALAFVARPV GTAISMAVQR RWGRGTKLTL ALFLLGASTA
GMAFLPSYNS VGHIAIIALV VLRLGQGVAL GGTWDGLPSL LAMSAPPERR GWYAMIGQLG
APVGFALAAS LFAYLYSNLS VQEFLDWGWR FPFFVAFAIN VVALFARLRL IVGQSYTEMM
QQRELEPVGA LELMRSEGRN VVLGAFAALA SFALFHVVTV FPLSWISMYS EQSITHVLGV
QIAGAFCAAV AIAISGRLAD RVGRRNTLGA MACLIGVFSL VTPWLLSSGT VGNNIFILVG
FVLLGLSYGQ ASGTVTANFS PRFRYTGAAL SADLAWLVGA AFAPLVALGL SAKFGLIAVS
VYLLSGVVCT LLALRINRLI ERRE
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