| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2223 |
|---|
| Symbol | |
|---|
| ID | 4667338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2443978 |
|---|
| End bp | 2445027 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639823428 |
|---|
| Product | ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_970575 |
|---|
| Protein GI | 120610897 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR01433] cytochrome o ubiquinol oxidase subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.354726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0191751 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAA CCATGAAACT CCGCGGGCCC GCGTGGCTCG GCGCGGCCGC ACTGGCTGCC
AGCCTCGCCG GCTGCAGCAA GGCCGTCGTC CTCAACCCGG CGGGTGACAT CGCCGCGCAG
CAAGGCCAGC TGGTGGTGAC CGCCACGCTG CTGATGCTGA TCATCATCGT CCCGGTGATC
CTGCTCACCT TCCTCTTCGC CTGGAAATAC CGCCAGTCGA ACACCGAGGC CGAGTACGAC
CCCGACTGGC ACCACTCCAC CACGCTGGAA CTGGTGATCT GGACCGTTCC CCTGATGATC
ATCATCGCCC TGGGGGCGCT GACCTGGATC AGCACCCACA AGCTCGACCC GTACCGCCCG
CTGGACCGCA TCGATGCCGC CCGCGCGCTG CCGGCCAGCG TCAAGCCGCT GGAGATCCAG
GTGGTGGCCA TGGACTGGAA GTGGGCCTTC TTCTACCCCG AGCAAGGCAT CGCCACGGTG
AACGAAGTGG CCGCTCCCGT GGACCGCCCC ATCCTCTTCA AGCTGACGTC CACCTCGACG
ATGAACGCGT TCTACGTGCC CGACCTCGCC GGCATGATCT ACGCCATGCC CGGCATGCAG
ACCGAGCTGA ACGCCATCAT CAACAAGGCA GGCGTCTTCC ACGGCTTCTC GTCGCACTAC
AGCGGCCCGG GCTTCTCCGG CATGACGTTC AAGTTCCACG GCCTGAGCGA CGGCGACTTC
GACAAGTGGG TCGCCGACGC CAAAGGTTCC GGCAAGGCGC TGGACGCCAA GACCTATCTC
GCCCTCGCCA AGCCCAGCGA GCGCAACCCC GTGGAGCGCT TCGCATCCGT CGAAGCCGGC
CTCTACGAGA AGGTGCTCAA CCGCTGCGTC GAGGACGGCA AGATGTGCAT GCACCACATG
ATGGCCATCG ATGCCAACGG CGGTGAGGCC TACCTCAAGG CCGTCGGCCT GAACCTGCCC
CAGGACGTGT GCACGGCCGA GAATTCCGCG CGCGTGATCG CCTCCCTGGA AACGACGCGC
GAGACCGCGT CCGCCACCAC CCCGCAATGA
|
|---|
| Protein sequence | MLKTMKLRGP AWLGAAALAA SLAGCSKAVV LNPAGDIAAQ QGQLVVTATL LMLIIIVPVI
LLTFLFAWKY RQSNTEAEYD PDWHHSTTLE LVIWTVPLMI IIALGALTWI STHKLDPYRP
LDRIDAARAL PASVKPLEIQ VVAMDWKWAF FYPEQGIATV NEVAAPVDRP ILFKLTSTST
MNAFYVPDLA GMIYAMPGMQ TELNAIINKA GVFHGFSSHY SGPGFSGMTF KFHGLSDGDF
DKWVADAKGS GKALDAKTYL ALAKPSERNP VERFASVEAG LYEKVLNRCV EDGKMCMHHM
MAIDANGGEA YLKAVGLNLP QDVCTAENSA RVIASLETTR ETASATTPQ
|
|---|
| |