Gene Aave_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2220 
Symbol 
ID4667442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2440862 
End bp2441290 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content65% 
IMG OID639823425 
Productcytochrome C oxidase subunit IV 
Protein accessionYP_970572 
Protein GI120610894 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.103068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.103821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC AGAATTCGCA CGCACACGCA CACGCCCACG CAGGGCATGA CGACCACCAC 
CACGACGACG GCCCGCACAG CACCTTCTCG GGCTACATGG TCGGCTTCGT GCTGTCGGTC
ATCCTCACGG CGATCCCGTT CTGGCTCGTC ATGGCCAAGG TGATCTCCGA CCGCAACACG
GCCGTGCTGG TGCTCGGCGC CTTCGCCGTG GTGCAGATCC TGGTCCACAT GGTCTGCTTC
CTGCACATGA ACGGCAAGGT GGAAGGCGGC TGGACCATGC TGTCCACCAT CTTCACCGTG
GTGTTCGTGG CCATCGCCAT CGCCGGCACG CTGTGGGTGA TGTTCCACAT GAACACGAAC
ATGATGCCGG AGCACACCAT GCCCGCGTCC ACGGCGCCCC TGCCCCCGCC GGTGAACAAC
GCGCCCTGA
 
Protein sequence
MSAQNSHAHA HAHAGHDDHH HDDGPHSTFS GYMVGFVLSV ILTAIPFWLV MAKVISDRNT 
AVLVLGAFAV VQILVHMVCF LHMNGKVEGG WTMLSTIFTV VFVAIAIAGT LWVMFHMNTN
MMPEHTMPAS TAPLPPPVNN AP