Gene Aave_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2212 
Symbol 
ID4667196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2433258 
End bp2434115 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content74% 
IMG OID639823417 
ProductXRE family transcriptional regulator 
Protein accessionYP_970564 
Protein GI120610886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.721078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG CCCTTCAAGC CGGCCCCCAC CGGCCCGCAC ATCCCTCCCC GGTCCCCGGC 
ACGCATTCGC CCTTCGGGGA CCACCTGCGC CACTGGCGCC GGCAGCGCCG CCTGAGCCAG
CAGGACCTGG CGCTGGAGGC CGAGGTATCC ACGCGCCACC TGAGCTGCGT GGAAACGGGC
CGTGCCGCGC CCAGCCGCGA CATGGTGCTG CGGCTGGCCG AGCGCCTGGC CGTCCCCCTG
CGCGAACGCA ACGCCCTGCT GGTCGCCGCC GGCTTCGCGC CCATGTACGC GGCGCGGGGG
CTGGACCACC CCGACATGCG CGCCGCGCGC GAGGCCGTCG ATCTGGTGCT GCGCGGCCAT
GAGCCCTACC CGGCCCTCGC CGTGGACCGC CACTGGAACA TGGTCGCCGC CAATGCGGTG
GTGCCGCTGC TGCTGCAGGG GGTGGCAGGC CACCTGCTCG CACCGCCCGT GAACGTGCTC
CGGCTGTCGC TGCACCCCGA AGGGCTGGGG CCGCGCCTGG CCAATGCCGC CGCCTGGAAG
GCACACCTGC TGCACCGCCT GGACCAGCAG ATCGCGGCGC ACGGCGACGC GCCGCTGCTG
GCACTGCGGG ACGAACTCGC CGGCTACCCC GTGCAGGACG GCCCGCCCGA GAGCGATCCG
CCGGCATTCA CCGGGCCGGG TGCCGGCATC GCCCTGCCTC TGCGCCTGCG CACCGCCACC
GGCATCCTCT CCTTCATCAC CACGATCACC GTGTTCGGCA CCCCGGTGGA CGTCACGCTG
CAGGAACTCG CCGTGGAGTC GTTCTTTCCG GCGGACGACG CCACGCGCGA AGCGCTGGCG
CGACTTTCCG CCGCCTGA
 
Protein sequence
MTSALQAGPH RPAHPSPVPG THSPFGDHLR HWRRQRRLSQ QDLALEAEVS TRHLSCVETG 
RAAPSRDMVL RLAERLAVPL RERNALLVAA GFAPMYAARG LDHPDMRAAR EAVDLVLRGH
EPYPALAVDR HWNMVAANAV VPLLLQGVAG HLLAPPVNVL RLSLHPEGLG PRLANAAAWK
AHLLHRLDQQ IAAHGDAPLL ALRDELAGYP VQDGPPESDP PAFTGPGAGI ALPLRLRTAT
GILSFITTIT VFGTPVDVTL QELAVESFFP ADDATREALA RLSAA