| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2202 |
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| Symbol | |
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| ID | 4668217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2421878 |
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| End bp | 2423686 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639823407 |
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| Product | succinate dehydrogenase subunit A |
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| Protein accession | YP_970554 |
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| Protein GI | 120610876 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.443729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACA CCAAAGCGAA CATCACCACG CGCAAGTTCG ACGTCGTCAT CGTCGGCGCG
GGCGGCTCCG GCATGCGTGC CGCACTGGAA CTCTCCCGCG CGGGCCTGAA CGTGGCCTCG
CTCTCCAAGG TCTTCCCCAC CCGTTCGCAC ACCGTGGCGG CGCAGGGCGG CGTGTCGGCC
TCGCTCGGCA ACATGAGCGA GGACAACTGG CACTACCACT TCTACGACAC CATCAAGGGC
TCCGACTGGC TGGGCGACCA GGATGCCATC GAGTTCATGT GCCGCGAAGC CCCCAAGGTG
GTGTATGAGC TGGAACACTT CGGCATGCCC TTCGACCGCA ACCCGGACGG CACGATCTAC
CAGCGCCCCT TCGGCGGCCA CACGGCCAAC TACGGCGAGA AGCCCGTGCA GCGCGCCTGC
GCCGCGGCCG ACCGCACCGG CCACGCGATG CTGCACACGC TCTACCAGCA GAACGTGAAG
GCCAAGACGA ACTTCTTCGT CGAGTGGATG GCCCTGGACC TGATCCGCGA CGCCTCCGGC
GACGTGGTCG GCGTGACGGC CCTCGAACTG GAAACCGGCG AGCTCTACCA GCTCCAGGCC
AAGGCCGTTC TGCTGGCCAC CGGTGGCGCC GGCCGCATCT TCGCGGCATC GACCAACGCC
TTCATCAACA CCGGCGACGG CCTGGGCATG GCGGCGCGCG CCGGCATCCC GCTGCAGGAC
ATGGAGTTCT GGCAGTTCCA CCCCACCGGC GTGGCCGGCG CGGGCGTGCT GCTGACCGAG
GGCTGCCGCG GCGAGGGCGC CATCCTGCTC AACAGCAACG GCGAACGCTT CATGGAGCGC
TACGCGCCCA CCCTGAAGGA CCTGGCGCCG CGCGACTTCG TCTCGCGCTC GATGGACCAG
GAGATCAAGG AAGGCCGCGG CTGCGGTCCC AACAAGGACT ACGTGCTGCT CAAGCTCGAC
CACCTGGGCG CGGACACCAT CCACAAGCGC CTGCCCTCGG TGTACGAGAT CGGCGTCAAC
TTCGCCAACG TGGACATCAC GAAGGAACCG ATCCCGGTCG TGCCCACCAT CCACTACCAG
ATGGGCGGCA TCCCGACCAA CATCAACGGC CAGGTCGTGA TCCAGAACGG CGACGTGCAC
AACCAGGTGG TGAACGGCCT CTACGCCGTG GGCGAATGCT CCTGCGTGTC CGTGCACGGC
GCCAACCGCC TGGGCACGAA CTCGCTGCTC GACCTGCTGG TGTTCGGCAA GTCCGCCGGC
CGCCACATCG TCGAGATGGT CAAGAACAGC GGCGAGCACA AGCCGCTGCC GGCCGACGGC
GCAGACCGCA CGCTGGCCCG CCTCAACCAG CTGCAGGAAT CCAGCCAGGG CATCTATGCC
CAGGACATCG CCAACGACAT CCGCGCATCG ATGCAGCAGC ACGCCGGCGT GTTCCGCACG
CAGGAAGGCA TGGACGAAGG CGTGGTGAAA ATCAACGCGA TCCGCGAGCG CGTGGGCGCG
ATCACGCTGA AGGACAAGTC CAAGGTGTGG AACACGGCCC GCATGGAAGC GCTGGAAGTG
GACAACCTGA TCGAGGTCGC CCAGGCGACG ATGGTCTCGG CCGCAGCCCG CAAGGAATGC
CGCGGCGCGC ACACGGTGTA CGACTACGAG CACCCCGCCG ACCACCCCGA CTTCCCGCTG
GGCCGCAACG ACAAGGAATG GATGAAGCAC ACGCTGTGGC ACAGCGAGAG CAACAGCCTC
ACCTACAAGC CCGTGAACCT CCAGCCCCTG ACCGTGGACA GCGTGCCGCC CAAGGTCCGC
ACGTTCTGA
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| Protein sequence | MSYTKANITT RKFDVVIVGA GGSGMRAALE LSRAGLNVAS LSKVFPTRSH TVAAQGGVSA
SLGNMSEDNW HYHFYDTIKG SDWLGDQDAI EFMCREAPKV VYELEHFGMP FDRNPDGTIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAM LHTLYQQNVK AKTNFFVEWM ALDLIRDASG
DVVGVTALEL ETGELYQLQA KAVLLATGGA GRIFAASTNA FINTGDGLGM AARAGIPLQD
MEFWQFHPTG VAGAGVLLTE GCRGEGAILL NSNGERFMER YAPTLKDLAP RDFVSRSMDQ
EIKEGRGCGP NKDYVLLKLD HLGADTIHKR LPSVYEIGVN FANVDITKEP IPVVPTIHYQ
MGGIPTNING QVVIQNGDVH NQVVNGLYAV GECSCVSVHG ANRLGTNSLL DLLVFGKSAG
RHIVEMVKNS GEHKPLPADG ADRTLARLNQ LQESSQGIYA QDIANDIRAS MQQHAGVFRT
QEGMDEGVVK INAIRERVGA ITLKDKSKVW NTARMEALEV DNLIEVAQAT MVSAAARKEC
RGAHTVYDYE HPADHPDFPL GRNDKEWMKH TLWHSESNSL TYKPVNLQPL TVDSVPPKVR
TF
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