| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2186 |
|---|
| Symbol | |
|---|
| ID | 4668963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2403648 |
|---|
| End bp | 2404937 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639823391 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_970538 |
|---|
| Protein GI | 120610860 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCG ATTCCTACTG GCTCGATTCA CTGCCGCCCC TGGCGGTGCC CACGCCCGGC
CTGCCTGCCC GGGTGGACGT GGCCATCGTG GGAGCGGGTT TCACCGGACT GTCCGCTGCC
CACGCGCTGG CGGGCAAAGG CGCCAGCGTG GCGGTCCTGG ACGCGGGGGC CACCGTGGCG
CCCGAGGCTT CGGGGCGCAA TGGCGGCCAC GTGAACAACG GGCTGGCCGT GGACTACGCG
GACGTGGCCG CCCGCGTCGG AGTGGAGCAG GCACGCGCCT GGTACCACGC CTACGATGCC
GCGGTGGACA CGGTGGCGCG GCTGGTGCGC GAGGAGTCCA TCGACTGCGA TTTCCTGCGG
CACGGCAAGC TCAAGCTCGC TACCCGGCCG CAGCACCTGG ACGCGCTGCG GCGCAGCGCG
GAACGGCTCA TCGCCGATGG CGTGGATACC GACGTCGAGG TGCTCGACGC GGACCGCGTG
GCCGCGGAAG TGCAGAGCGA CCGCTTCATC GGCGGCCTGC TCTACAAGCG CAGCGGCCAG
ATGCACATGG GGCGCTTCGC CCAGGGCCTG GCCCGCGCCG CGGTGCGCCG CGGCGCGCAG
ATCCACCTGG ATACCCGCGT GGACCGCCTC GAGCGGCTGC AGGGTCAGGC CCACCGCCTG
CACACCTCCC GCGGCACGGT CGAGGCGAAG CAGGTGCTGC TGGCCACCGG TGCCTCGCGC
CACGGCGGCT ACGGCACGTT CGGCTGGCTG CGCCGTCGCA TCGTGCCGAT CGGCAGCTTC
ATCGTGGTGA CCGAGCCGCT GGGCGCGGAG CGCGCGCAGG CCCTGCTGGC CGGCCGCCGC
ACCTACGTGA CCATCGCCAA CATCCACCAT TACTTCCGGC TCACTGCCGA CCACCGCCTG
GTGTTCGGCG GACGCGCGAA GTTCGCTGTT TCCAGCCCGC AGCAGGATGC GGCCAGCGGC
GAGATCCTGC GCCAGGGGCT CGCGGAGACC TTTCCGCACC TCGGGAAGGT GCGCATCGAC
CACTGCTGGG GCGGCCTCGT GGACATGACG CAGGACCGCC TGCCCCATGC CGGCGAGCGC
GACGGCGTCT TCCATTCGAT GGGCTACAGC GGGCATGGCA CGCAGATGTC CGTCCACATG
GGCCAGTGCA TGGCCGAGGT GATGGCCGGC AATGCCGCGG CCAATCCATG GCGCGGCCGC
GAGTGGCCAG CCATTCCCGG GCATCTCGGG CCGCCCTGGT TCCTGCCGGC CGTGGGGCTG
TACTACCGCC TCAAGGACCG GATCGGCTGA
|
|---|
| Protein sequence | MKLDSYWLDS LPPLAVPTPG LPARVDVAIV GAGFTGLSAA HALAGKGASV AVLDAGATVA
PEASGRNGGH VNNGLAVDYA DVAARVGVEQ ARAWYHAYDA AVDTVARLVR EESIDCDFLR
HGKLKLATRP QHLDALRRSA ERLIADGVDT DVEVLDADRV AAEVQSDRFI GGLLYKRSGQ
MHMGRFAQGL ARAAVRRGAQ IHLDTRVDRL ERLQGQAHRL HTSRGTVEAK QVLLATGASR
HGGYGTFGWL RRRIVPIGSF IVVTEPLGAE RAQALLAGRR TYVTIANIHH YFRLTADHRL
VFGGRAKFAV SSPQQDAASG EILRQGLAET FPHLGKVRID HCWGGLVDMT QDRLPHAGER
DGVFHSMGYS GHGTQMSVHM GQCMAEVMAG NAAANPWRGR EWPAIPGHLG PPWFLPAVGL
YYRLKDRIG
|
|---|
| |