Gene Aave_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2185 
Symbol 
ID4668924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2402930 
End bp2403595 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID639823390 
Producthaloacid dehalogenase, type II 
Protein accessionYP_970537 
Protein GI120610859 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTC GTCCCAAGTA TGTGACTTTC GACTGCTATG GCACGCTCAC CCGCTTTCGC 
ATGGGTGAGC TGACGCGCGA GTTGTTCGCC GATCGGATTC CGGCGGAGCG CATGGAGCAG
TTCATCGCCG ATTTCACCGC CTACCGCTTC GACGAAGTGC TGGGCGACTG GCAGCCCTAC
GAGGTGGTGC TGAAGAATGC CGTGCGCCGC CTGTGCAAGA AGTGGAAGAT CCAGTACTTC
GACACCGACG GCCAGACTTA CTACGACGCC GTGCCCACCT GGGACCCCCA CGCCGACGTG
CCGGCCGGCC TCGCCAAGGT GGCCAAGGAG ATTCCGCTGG TCATCCTCTC GAACGCTGCC
GACGAGCAGA TCCAGAAGAA CGTGGCCATG CTGGGCGCGC CGTTCCACCG CGTCTACACC
GCGCAGCAGG CCCAGGCCTA CAAGCCCCGG CTCAAGGCCT TCGAATACAT GCTCGACTCG
CTGGGCTGCA ATCCCGAGGA CGTGCTGCAC GTGTCTTCCA GCCTGCGCTA CGACCTGATG
TCGGCCGACG ACATCGGCAT CGTCCACAAG GTGTTCGTGA ACCGCGGCCA CGGCCCCGGC
AACCCTGCCT ACCGCTACAC CGAGATCCAG GACATCGGCG GCCTGCCCGG CGTGGTGGGG
CTCTGA
 
Protein sequence
MTFRPKYVTF DCYGTLTRFR MGELTRELFA DRIPAERMEQ FIADFTAYRF DEVLGDWQPY 
EVVLKNAVRR LCKKWKIQYF DTDGQTYYDA VPTWDPHADV PAGLAKVAKE IPLVILSNAA
DEQIQKNVAM LGAPFHRVYT AQQAQAYKPR LKAFEYMLDS LGCNPEDVLH VSSSLRYDLM
SADDIGIVHK VFVNRGHGPG NPAYRYTEIQ DIGGLPGVVG L