Gene Aave_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2180 
Symbol 
ID4668725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2397461 
End bp2397955 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID639823385 
ProductAsnC family transcriptional regulator 
Protein accessionYP_970532 
Protein GI120610854 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.642744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.728347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CCTTCAAGAT CGACCGACTG GACCTGCGCA TCCTGGCGCA ACTGCAGAAG 
AACGGGCGCA TGACCAACGT GGACCTCGCG GACGCGGTCG GCCTCTCGCC CAGCCCCTGC
CTGATCCGCG TCAAGCGCCT GGAACAGGCG GGCTACATCG CCGGCTACGG CGCCCACCTG
CGCCTGGAGA AGCTCGGTGA CACCCTCACC GTGTTCACCG AAGTCACCCT CTCGGACCAC
CGCCGCGAAG ACTTCGCGCG CTTCGAGGCG GCGCTGCGCG AAGTGGACGA AGTGCTGGAA
TGCCACCTCG TGAGCGGCGG CTATGACTAC CTGCTGCGCT TCATCACGCG GGGCGTGAAC
CATTACCAGG AAGTGATCGA AGAGCTGCTG CAGCGCAACA TCGGTATTGC GAAGTACTTC
AGCTACATCG TCATCAAGTC GCCGTTCACC AAGACGCACT GTCCGATCGA GAGGTTGTTT
CCGCATCAGA GGTGA
 
Protein sequence
MTEAFKIDRL DLRILAQLQK NGRMTNVDLA DAVGLSPSPC LIRVKRLEQA GYIAGYGAHL 
RLEKLGDTLT VFTEVTLSDH RREDFARFEA ALREVDEVLE CHLVSGGYDY LLRFITRGVN
HYQEVIEELL QRNIGIAKYF SYIVIKSPFT KTHCPIERLF PHQR