Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2167 |
Symbol | |
ID | 4669850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2381854 |
End bp | 2383167 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639823372 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_970519 |
Protein GI | 120610841 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.880536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCC TCCACGCGCT GATCCGCGAT TTCAGCCAAT CCCATACCTG GATCGAAGCG GCCGTGCTGG CCGCCTGCCT GGCGCTCGCC TATTTCGCCA GCCGCGTCCT CGGCCGCCAG CAGCCGCCCG ATTCGGTGTG GTTCGGGCGC CGCACGGTCG ATGGGCTGAT GTTCCCGCTG CTGGCACTGG CCCTGGTCTA TGCCGCCCGC GTGGGCGTGG AGACGGTGCT GGCGCGGCCC GTATTCCTGC TGCGCGTGGC GGTGCCGGTG CTCAGCTCGC TGGTGCTGGT CCGGTTCTTC GCGCGCATCC TCGCCAACGC GTTCCCGAAA TCCGCGGCCA TGCGGCTGGT GGAGCGCATC GTCTCGTGGC TGGCCTGGGG CGTGGCGGTG CTCTGGATCG TCGGTCTGTT GCCGGCGGTG CGCGCCGAGC TGGCCGGCGT CGCCATCCAT TTCGGCAAGT CGCGGGTCAC GGCGCTCACG CTGATCGAAG GATCGCTCTC GGCCACCGTG GTGATGCTGC TGGCGCTGTG GCTCTCGTCC ACCGTGGAGC GGCGCCTGCT GGACCGGACG ATCGTCGATC TTTCCATGCG CAAGGTGGCC GCCAACGCCA CGCGGGCGGG GCTGCTGCTG GTGGGCCTGC TGTTCGCACT CTCGGCCGTG GGGGTGGACC TGACGGCGCT GTCGGTGCTG GGCGGTGCCG TCGGCGTGGG CCTGGGCTTC GGTTTGCAGA AGCTCGCCTC CAACTACGTG AGCGGCTTCG TGATTTTGCT GGAGCGCTCC CTGCGCATCG GCGACAACGT GCGCGTGGAC GGCTTCGAGG GCCGCATCAC CGACATCAAG ACCCGCTACA CCCTGATCCG CGCGGGCAAC GGGCGCGAAT CCATCGTGCC CAACGAGACG CTCATCACGC AGCGCGTGGA GAACCTCTCG GACGCGGACC GCAAGTTCAA CATCACCACG AACATCACCG TGGGCTACGA CAGCGACGTG TCGCGCGTGC AGGCCATCCT CTGCGCAGCC GCGGCCGCCC AGCCGCGCGT GCTGGCCGAC CCGGCGCCGG TGGCCTACCT GGTGAACTTC GCTCCCGACG GGCTGGAATT CAGCCTCAAC TTCTGGGTGA GCGACCCTTC GGCCGGAACG GTCAATCTGC GCTCGGCGAT CAACATCGCC ATCCTCGAAG GCCTGCGTGC CGATGGGATC GACATCCCCT ATCCGCAGCG CGTGGTGCGC CTGCAGGCCG ACGGCCCGCC GCCCGCCGGG CCCCTGCAGG TCGCTCATGT CGCACAAGCG TCCTCGCCGC CGCCCACGGC GTGA
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Protein sequence | MDALHALIRD FSQSHTWIEA AVLAACLALA YFASRVLGRQ QPPDSVWFGR RTVDGLMFPL LALALVYAAR VGVETVLARP VFLLRVAVPV LSSLVLVRFF ARILANAFPK SAAMRLVERI VSWLAWGVAV LWIVGLLPAV RAELAGVAIH FGKSRVTALT LIEGSLSATV VMLLALWLSS TVERRLLDRT IVDLSMRKVA ANATRAGLLL VGLLFALSAV GVDLTALSVL GGAVGVGLGF GLQKLASNYV SGFVILLERS LRIGDNVRVD GFEGRITDIK TRYTLIRAGN GRESIVPNET LITQRVENLS DADRKFNITT NITVGYDSDV SRVQAILCAA AAAQPRVLAD PAPVAYLVNF APDGLEFSLN FWVSDPSAGT VNLRSAINIA ILEGLRADGI DIPYPQRVVR LQADGPPPAG PLQVAHVAQA SSPPPTA
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