Gene Aave_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2161 
Symbol 
ID4669297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2374019 
End bp2376073 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content73% 
IMG OID639823366 
Producttransglutaminase domain-containing protein 
Protein accessionYP_970513 
Protein GI120610835 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0907066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC TGCGCAAGAC GTTCTCGAAC CTGCCGCGCG AGACGCGCGA CACGCTCTTC 
CTGCTCGTCA CGGTGGGCTG GGTCGTGCTG CCGCTGGCGC CCTACCTGCC CGCGTGGACC
ACGGTGCTCG CCGCCGCCGT GCTGGTCTGG CGCGGCGTGC TGGCGCTGCG CGGCCGCCCG
CAGCCGGGCC GCTGGCAACT GGGCGTGCTG CTGGCCGCAT CGGTCGCGCT CACGGTGGTG
TCGCACGGCA CCATCGTCGG CCGCGACGCG GGCGTCACGC TCATCGTGAT GCTGCTCGCG
CTCAAGACGA TGGAAGTGCA TGCCCGGCGC GACGCCATGG TGCTCTTCTT CCTGGGCTTC
TTCACGATGC TCAGCAATTT CTTCTTCTCG CAATCGCTCG CCACGGCCGC CGCGATGCTG
GTCGCGCTGC TGGGCCTGCT GACCGCCCTG GTCAATGCCC ACATGCCGGT GGGCCGGCCG
CCGCTGTCCG TGCCGCTGCG GCTGGCGGGG CGCATGGCGC TGCTGGGCGC GCCCGTCATG
CTCGCGCTGT TCCTGCTGTT CCCGCGCATG GCGCCGCTCT GGGGCATGCC CAGCGAGAAC
CCGACGGGCC GCAGCGGGCT GTCGGGCCGC ATGGAGATCG GCAACGTGGC CTCGCTCGCG
CTCGACGACG GCATCGCGCT GCGCGTGCGC TTCGAGACAC CAGGCGGCGA GCCGCCGCCG
CAGAGTGCGC TGTATTTCAG GGGGCCGGTG TTCTCGGCCT TCGATGGGCG CGAATGGTTC
GCCTTCGGGC AGCCGGGCGC TCCGGCGGCT TCCTGGCGGC CACCCGCTCC CGCGGCGCTG
CAGGTGGAGG GCGAGCCGCT GCGCTACGAA GTCACGCTGG AGGCACTGCG CGTGCCCTGG
CTGCTCACGC TCGATGCCGC GCCCGAGTCG CCCGTGCTGC CGCCGGGCCT GCGCGCGTCG
ATGGCGCCCG AACTCTCCTG GGTCGCGAGC CGCCCCATCA ACGAGGTGCT GCGCTACCGC
GCCGCCAGCT ACCCGCGCTT CACGCACGGC CCAATGGAGA ACTCTCCGAG GCTGCGCCCG
TACCTGGAAC TGCCCGAGGG TTTCGATCCG CGCACGCGCG ACCTCGCCCG CCGGATGCTG
GCGGAGCCGG CCGTCGCCGC AGGCGGCGCT CCGGCTTTCG TGCAGGCCGC GCTGGAGCGG
CTGCGCACGG GCGGCTACAG CTATACGCTG GAGCCGGGCG TCTATGCCGA GCACACCGCC
GATACGTTCT GGTTCGACCA GAAAGCGGGC TTCTGCGAGC ACATCGCGTC GGCCTTCGCG
GTGCTGCTGC GCGCGGCCGG CGTCCCGGCG CGCATCGTGA CGGGCTACCA GGGCGGCGAG
ATGAACGGAG TGGACGGCTA CTGGACCGTG CGCCAGGCCG ACGCCCATGC CTGGACCGAA
GTCTGGCTGG CAGGACAAGG CTGGGTACGC GTGGACCCGA CCGGGGCCGT CTCGCCGGCC
CGCATCGGCA ACTTCCAGCG CCTGCAGGCG CCGCGCGGGG TGTTCGGCAA TGCGGTGGAT
ACCGTCATCG GCCGCGGCAT CGCCGCCCGC GCGCGCGCCG TGTGGGAGGC CGTCAACAAC
CGCTGGAACC AGTGGGTGCT CAACTACACG CAGAGCCAGC AGCTGGATCT GCTCAAGGCC
CTGGGCATCG CGTCGCCCGA CGCGCAGGAC CTGGCCCGCG TGCTCGGTGC CCTGGCCGCC
GCCGCGGCGC TGGCCGGCGT CGGCTGGAAC CTGTGGGAAC GCCGCCGGCA GGACCCCTGG
CTGCGCCTGC TGGAGCGGGC ACGCCGGCGG CTCGCGCGCG CCGGCCTGCC CCTGCCCGGC
CACCTGCCAC CGCGCGCCAT GGCCCAGCAG GCACGCGACC GATTCGGGGA GTCCGCCGAA
CCGGCCGCCA GCTGGCTGCT GCGCATGGAC CAGGCGCGTT ACGCTCGCCA CTCCGATGCC
ACGCTGGCGG CCCTGCGACG GGAGCTGCGC GGCCTGCGCT GGCCCTCGTC CGGCCCCCCT
TCTGCGCAGC ACTGA
 
Protein sequence
MTALRKTFSN LPRETRDTLF LLVTVGWVVL PLAPYLPAWT TVLAAAVLVW RGVLALRGRP 
QPGRWQLGVL LAASVALTVV SHGTIVGRDA GVTLIVMLLA LKTMEVHARR DAMVLFFLGF
FTMLSNFFFS QSLATAAAML VALLGLLTAL VNAHMPVGRP PLSVPLRLAG RMALLGAPVM
LALFLLFPRM APLWGMPSEN PTGRSGLSGR MEIGNVASLA LDDGIALRVR FETPGGEPPP
QSALYFRGPV FSAFDGREWF AFGQPGAPAA SWRPPAPAAL QVEGEPLRYE VTLEALRVPW
LLTLDAAPES PVLPPGLRAS MAPELSWVAS RPINEVLRYR AASYPRFTHG PMENSPRLRP
YLELPEGFDP RTRDLARRML AEPAVAAGGA PAFVQAALER LRTGGYSYTL EPGVYAEHTA
DTFWFDQKAG FCEHIASAFA VLLRAAGVPA RIVTGYQGGE MNGVDGYWTV RQADAHAWTE
VWLAGQGWVR VDPTGAVSPA RIGNFQRLQA PRGVFGNAVD TVIGRGIAAR ARAVWEAVNN
RWNQWVLNYT QSQQLDLLKA LGIASPDAQD LARVLGALAA AAALAGVGWN LWERRRQDPW
LRLLERARRR LARAGLPLPG HLPPRAMAQQ ARDRFGESAE PAASWLLRMD QARYARHSDA
TLAALRRELR GLRWPSSGPP SAQH