| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2161 |
|---|
| Symbol | |
|---|
| ID | 4669297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2374019 |
|---|
| End bp | 2376073 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639823366 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_970513 |
|---|
| Protein GI | 120610835 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0907066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC TGCGCAAGAC GTTCTCGAAC CTGCCGCGCG AGACGCGCGA CACGCTCTTC
CTGCTCGTCA CGGTGGGCTG GGTCGTGCTG CCGCTGGCGC CCTACCTGCC CGCGTGGACC
ACGGTGCTCG CCGCCGCCGT GCTGGTCTGG CGCGGCGTGC TGGCGCTGCG CGGCCGCCCG
CAGCCGGGCC GCTGGCAACT GGGCGTGCTG CTGGCCGCAT CGGTCGCGCT CACGGTGGTG
TCGCACGGCA CCATCGTCGG CCGCGACGCG GGCGTCACGC TCATCGTGAT GCTGCTCGCG
CTCAAGACGA TGGAAGTGCA TGCCCGGCGC GACGCCATGG TGCTCTTCTT CCTGGGCTTC
TTCACGATGC TCAGCAATTT CTTCTTCTCG CAATCGCTCG CCACGGCCGC CGCGATGCTG
GTCGCGCTGC TGGGCCTGCT GACCGCCCTG GTCAATGCCC ACATGCCGGT GGGCCGGCCG
CCGCTGTCCG TGCCGCTGCG GCTGGCGGGG CGCATGGCGC TGCTGGGCGC GCCCGTCATG
CTCGCGCTGT TCCTGCTGTT CCCGCGCATG GCGCCGCTCT GGGGCATGCC CAGCGAGAAC
CCGACGGGCC GCAGCGGGCT GTCGGGCCGC ATGGAGATCG GCAACGTGGC CTCGCTCGCG
CTCGACGACG GCATCGCGCT GCGCGTGCGC TTCGAGACAC CAGGCGGCGA GCCGCCGCCG
CAGAGTGCGC TGTATTTCAG GGGGCCGGTG TTCTCGGCCT TCGATGGGCG CGAATGGTTC
GCCTTCGGGC AGCCGGGCGC TCCGGCGGCT TCCTGGCGGC CACCCGCTCC CGCGGCGCTG
CAGGTGGAGG GCGAGCCGCT GCGCTACGAA GTCACGCTGG AGGCACTGCG CGTGCCCTGG
CTGCTCACGC TCGATGCCGC GCCCGAGTCG CCCGTGCTGC CGCCGGGCCT GCGCGCGTCG
ATGGCGCCCG AACTCTCCTG GGTCGCGAGC CGCCCCATCA ACGAGGTGCT GCGCTACCGC
GCCGCCAGCT ACCCGCGCTT CACGCACGGC CCAATGGAGA ACTCTCCGAG GCTGCGCCCG
TACCTGGAAC TGCCCGAGGG TTTCGATCCG CGCACGCGCG ACCTCGCCCG CCGGATGCTG
GCGGAGCCGG CCGTCGCCGC AGGCGGCGCT CCGGCTTTCG TGCAGGCCGC GCTGGAGCGG
CTGCGCACGG GCGGCTACAG CTATACGCTG GAGCCGGGCG TCTATGCCGA GCACACCGCC
GATACGTTCT GGTTCGACCA GAAAGCGGGC TTCTGCGAGC ACATCGCGTC GGCCTTCGCG
GTGCTGCTGC GCGCGGCCGG CGTCCCGGCG CGCATCGTGA CGGGCTACCA GGGCGGCGAG
ATGAACGGAG TGGACGGCTA CTGGACCGTG CGCCAGGCCG ACGCCCATGC CTGGACCGAA
GTCTGGCTGG CAGGACAAGG CTGGGTACGC GTGGACCCGA CCGGGGCCGT CTCGCCGGCC
CGCATCGGCA ACTTCCAGCG CCTGCAGGCG CCGCGCGGGG TGTTCGGCAA TGCGGTGGAT
ACCGTCATCG GCCGCGGCAT CGCCGCCCGC GCGCGCGCCG TGTGGGAGGC CGTCAACAAC
CGCTGGAACC AGTGGGTGCT CAACTACACG CAGAGCCAGC AGCTGGATCT GCTCAAGGCC
CTGGGCATCG CGTCGCCCGA CGCGCAGGAC CTGGCCCGCG TGCTCGGTGC CCTGGCCGCC
GCCGCGGCGC TGGCCGGCGT CGGCTGGAAC CTGTGGGAAC GCCGCCGGCA GGACCCCTGG
CTGCGCCTGC TGGAGCGGGC ACGCCGGCGG CTCGCGCGCG CCGGCCTGCC CCTGCCCGGC
CACCTGCCAC CGCGCGCCAT GGCCCAGCAG GCACGCGACC GATTCGGGGA GTCCGCCGAA
CCGGCCGCCA GCTGGCTGCT GCGCATGGAC CAGGCGCGTT ACGCTCGCCA CTCCGATGCC
ACGCTGGCGG CCCTGCGACG GGAGCTGCGC GGCCTGCGCT GGCCCTCGTC CGGCCCCCCT
TCTGCGCAGC ACTGA
|
|---|
| Protein sequence | MTALRKTFSN LPRETRDTLF LLVTVGWVVL PLAPYLPAWT TVLAAAVLVW RGVLALRGRP
QPGRWQLGVL LAASVALTVV SHGTIVGRDA GVTLIVMLLA LKTMEVHARR DAMVLFFLGF
FTMLSNFFFS QSLATAAAML VALLGLLTAL VNAHMPVGRP PLSVPLRLAG RMALLGAPVM
LALFLLFPRM APLWGMPSEN PTGRSGLSGR MEIGNVASLA LDDGIALRVR FETPGGEPPP
QSALYFRGPV FSAFDGREWF AFGQPGAPAA SWRPPAPAAL QVEGEPLRYE VTLEALRVPW
LLTLDAAPES PVLPPGLRAS MAPELSWVAS RPINEVLRYR AASYPRFTHG PMENSPRLRP
YLELPEGFDP RTRDLARRML AEPAVAAGGA PAFVQAALER LRTGGYSYTL EPGVYAEHTA
DTFWFDQKAG FCEHIASAFA VLLRAAGVPA RIVTGYQGGE MNGVDGYWTV RQADAHAWTE
VWLAGQGWVR VDPTGAVSPA RIGNFQRLQA PRGVFGNAVD TVIGRGIAAR ARAVWEAVNN
RWNQWVLNYT QSQQLDLLKA LGIASPDAQD LARVLGALAA AAALAGVGWN LWERRRQDPW
LRLLERARRR LARAGLPLPG HLPPRAMAQQ ARDRFGESAE PAASWLLRMD QARYARHSDA
TLAALRRELR GLRWPSSGPP SAQH
|
|---|
| |