Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2161 |
Symbol | |
ID | 4669297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2374019 |
End bp | 2376073 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639823366 |
Product | transglutaminase domain-containing protein |
Protein accession | YP_970513 |
Protein GI | 120610835 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0907066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC TGCGCAAGAC GTTCTCGAAC CTGCCGCGCG AGACGCGCGA CACGCTCTTC CTGCTCGTCA CGGTGGGCTG GGTCGTGCTG CCGCTGGCGC CCTACCTGCC CGCGTGGACC ACGGTGCTCG CCGCCGCCGT GCTGGTCTGG CGCGGCGTGC TGGCGCTGCG CGGCCGCCCG CAGCCGGGCC GCTGGCAACT GGGCGTGCTG CTGGCCGCAT CGGTCGCGCT CACGGTGGTG TCGCACGGCA CCATCGTCGG CCGCGACGCG GGCGTCACGC TCATCGTGAT GCTGCTCGCG CTCAAGACGA TGGAAGTGCA TGCCCGGCGC GACGCCATGG TGCTCTTCTT CCTGGGCTTC TTCACGATGC TCAGCAATTT CTTCTTCTCG CAATCGCTCG CCACGGCCGC CGCGATGCTG GTCGCGCTGC TGGGCCTGCT GACCGCCCTG GTCAATGCCC ACATGCCGGT GGGCCGGCCG CCGCTGTCCG TGCCGCTGCG GCTGGCGGGG CGCATGGCGC TGCTGGGCGC GCCCGTCATG CTCGCGCTGT TCCTGCTGTT CCCGCGCATG GCGCCGCTCT GGGGCATGCC CAGCGAGAAC CCGACGGGCC GCAGCGGGCT GTCGGGCCGC ATGGAGATCG GCAACGTGGC CTCGCTCGCG CTCGACGACG GCATCGCGCT GCGCGTGCGC TTCGAGACAC CAGGCGGCGA GCCGCCGCCG CAGAGTGCGC TGTATTTCAG GGGGCCGGTG TTCTCGGCCT TCGATGGGCG CGAATGGTTC GCCTTCGGGC AGCCGGGCGC TCCGGCGGCT TCCTGGCGGC CACCCGCTCC CGCGGCGCTG CAGGTGGAGG GCGAGCCGCT GCGCTACGAA GTCACGCTGG AGGCACTGCG CGTGCCCTGG CTGCTCACGC TCGATGCCGC GCCCGAGTCG CCCGTGCTGC CGCCGGGCCT GCGCGCGTCG ATGGCGCCCG AACTCTCCTG GGTCGCGAGC CGCCCCATCA ACGAGGTGCT GCGCTACCGC GCCGCCAGCT ACCCGCGCTT CACGCACGGC CCAATGGAGA ACTCTCCGAG GCTGCGCCCG TACCTGGAAC TGCCCGAGGG TTTCGATCCG CGCACGCGCG ACCTCGCCCG CCGGATGCTG GCGGAGCCGG CCGTCGCCGC AGGCGGCGCT CCGGCTTTCG TGCAGGCCGC GCTGGAGCGG CTGCGCACGG GCGGCTACAG CTATACGCTG GAGCCGGGCG TCTATGCCGA GCACACCGCC GATACGTTCT GGTTCGACCA GAAAGCGGGC TTCTGCGAGC ACATCGCGTC GGCCTTCGCG GTGCTGCTGC GCGCGGCCGG CGTCCCGGCG CGCATCGTGA CGGGCTACCA GGGCGGCGAG ATGAACGGAG TGGACGGCTA CTGGACCGTG CGCCAGGCCG ACGCCCATGC CTGGACCGAA GTCTGGCTGG CAGGACAAGG CTGGGTACGC GTGGACCCGA CCGGGGCCGT CTCGCCGGCC CGCATCGGCA ACTTCCAGCG CCTGCAGGCG CCGCGCGGGG TGTTCGGCAA TGCGGTGGAT ACCGTCATCG GCCGCGGCAT CGCCGCCCGC GCGCGCGCCG TGTGGGAGGC CGTCAACAAC CGCTGGAACC AGTGGGTGCT CAACTACACG CAGAGCCAGC AGCTGGATCT GCTCAAGGCC CTGGGCATCG CGTCGCCCGA CGCGCAGGAC CTGGCCCGCG TGCTCGGTGC CCTGGCCGCC GCCGCGGCGC TGGCCGGCGT CGGCTGGAAC CTGTGGGAAC GCCGCCGGCA GGACCCCTGG CTGCGCCTGC TGGAGCGGGC ACGCCGGCGG CTCGCGCGCG CCGGCCTGCC CCTGCCCGGC CACCTGCCAC CGCGCGCCAT GGCCCAGCAG GCACGCGACC GATTCGGGGA GTCCGCCGAA CCGGCCGCCA GCTGGCTGCT GCGCATGGAC CAGGCGCGTT ACGCTCGCCA CTCCGATGCC ACGCTGGCGG CCCTGCGACG GGAGCTGCGC GGCCTGCGCT GGCCCTCGTC CGGCCCCCCT TCTGCGCAGC ACTGA
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Protein sequence | MTALRKTFSN LPRETRDTLF LLVTVGWVVL PLAPYLPAWT TVLAAAVLVW RGVLALRGRP QPGRWQLGVL LAASVALTVV SHGTIVGRDA GVTLIVMLLA LKTMEVHARR DAMVLFFLGF FTMLSNFFFS QSLATAAAML VALLGLLTAL VNAHMPVGRP PLSVPLRLAG RMALLGAPVM LALFLLFPRM APLWGMPSEN PTGRSGLSGR MEIGNVASLA LDDGIALRVR FETPGGEPPP QSALYFRGPV FSAFDGREWF AFGQPGAPAA SWRPPAPAAL QVEGEPLRYE VTLEALRVPW LLTLDAAPES PVLPPGLRAS MAPELSWVAS RPINEVLRYR AASYPRFTHG PMENSPRLRP YLELPEGFDP RTRDLARRML AEPAVAAGGA PAFVQAALER LRTGGYSYTL EPGVYAEHTA DTFWFDQKAG FCEHIASAFA VLLRAAGVPA RIVTGYQGGE MNGVDGYWTV RQADAHAWTE VWLAGQGWVR VDPTGAVSPA RIGNFQRLQA PRGVFGNAVD TVIGRGIAAR ARAVWEAVNN RWNQWVLNYT QSQQLDLLKA LGIASPDAQD LARVLGALAA AAALAGVGWN LWERRRQDPW LRLLERARRR LARAGLPLPG HLPPRAMAQQ ARDRFGESAE PAASWLLRMD QARYARHSDA TLAALRRELR GLRWPSSGPP SAQH
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