Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2158 |
Symbol | |
ID | 4669007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2369831 |
End bp | 2371372 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639823363 |
Product | major facilitator superfamily transporter |
Protein accession | YP_970510 |
Protein GI | 120610832 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.139146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTGC TTACTTCTCC TGCTTCGTCC CCGATGCAGC GGTGGCTCGT CCTGGCGGCG GTGATGCTGG CCTTCCTGCC GGTGGTGATC GACATGACGA TCCTCCACAT CGCCGTCCCG TCGCTGACGC TGGCGTTGAG CGCATCGGGC ACCCAGGTGC TCTGGATCAT CGACATCTAT CCGCTGCTCA TGGCGGGCCT GCTGGTGCCC ATGGGAACGC TGGCGGACCG CACCGGTCAC CGGCGGCTGC TGCTCGCCGG CCTGGCGGTC TTCGGCCTCG CATCGCTGCT GGCGGCATTC GCTCCCAGCC CGGCGATGCT GATCGCGGCG CGCGTGCTGC TCGCGCTGGG CGGCTCGATG ATCATGCCGT GCGTGCTCGG CATCATCCGC CGCACGTTCG AGGATGAACG GGAGCGCGCC ATGGCGCTGG GCCTCTGGGG CACCGTGGGC GCGGCGGGGG CTGCCGTGGG GCCGCTGGTC GGCGGGGCGC TGCTGGAGCA TTTCTGGTGG GGTGCCGCGT TCCTCATCAA CGTGCCGGTG ATGCTGGTCG TGTTCCCGGC CGTGTTCCTG CTGCTGCCGC GGTCGGAGCG CACAGCGGCC GGCCGGTGGC CTGCCGGGCA GGCACTGCTG CTGATCGCCG GCATGATCGC CGCGGTGTAC GGCCTCAAGT CGGGATTCGG GGGCGGGCAG CCGCCGGCCG TGGCGGCATC GGCGCTGGCG GCGGGAGCGG CCCTGCTGGC GGTGTTCGCG CGTCTGCAAC TGCGCTCGCC GACGCCGATG CTGGACCTGT CGCTGTTCTC GCGCCCTGCG ATCCTTGCAG GCATCGCCAT GGCGGTGGTC GCCACCGGCG CCCTGGCCGG GGTGGAGCTG ACACTGGCGC AGGAGCTGCA ATACGTGCTG GGCAAGAGCC CGCTGCAGGC CGGCATCTTC ATGGTGCCGA TCATGGCCGC GGCAGCCGTG GGCGGCCCCC TGGCCGGAAC CCTGTCGAAC CGCTTCGGAC TGCGCCGGGT CGCCAGCCTG TCCCTGGCGG TGTCCGGCGC GGCCCTGGCC TACCTGGCCC GGGCGGACTT CCACGAGGGC GGCGTGCCCG TGGCCGCGGC ACTGGCGCTG CTCGGTCTGG CGCTGAGCGT TGGGCTGACG GCGTCGTCCA TCGCGATCAT GGGGTCGGTC GAGGCGGACA GGGCCGGCGC GGCCGGGGCG CTGGAGGCCA CCGGCTACGA GCTGGGCAGC GGCCTGGGCA TCACCCTGTT CGGGGTGTTC ATGTCCGTCG TGTTCAGCCA TGCGATCGCG CTGCCGCCGG ATCTCGCGCC GCCGCTCGCC GTCCAGGCGG CCCGGTCGAT CGGCGATGCC TACGTGGTCG CGCAGCAACT GGCGGAGGGG CCGGCGGCCG CGCTGATCGG GGCCGGGCAG GCAGCCTTCT CGGTCGCCCA TCGGGTGCTG CTGAACACCT CCGCGGCGCT GATCGGCCTG CTGGCCGTGG CCGTGTTCAT CCTGCTGGCC GGCTACCGTG GCGGGCCGGG AGCTGCGGCG GGCGGGCACT GA
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Protein sequence | MSLLTSPASS PMQRWLVLAA VMLAFLPVVI DMTILHIAVP SLTLALSASG TQVLWIIDIY PLLMAGLLVP MGTLADRTGH RRLLLAGLAV FGLASLLAAF APSPAMLIAA RVLLALGGSM IMPCVLGIIR RTFEDERERA MALGLWGTVG AAGAAVGPLV GGALLEHFWW GAAFLINVPV MLVVFPAVFL LLPRSERTAA GRWPAGQALL LIAGMIAAVY GLKSGFGGGQ PPAVAASALA AGAALLAVFA RLQLRSPTPM LDLSLFSRPA ILAGIAMAVV ATGALAGVEL TLAQELQYVL GKSPLQAGIF MVPIMAAAAV GGPLAGTLSN RFGLRRVASL SLAVSGAALA YLARADFHEG GVPVAAALAL LGLALSVGLT ASSIAIMGSV EADRAGAAGA LEATGYELGS GLGITLFGVF MSVVFSHAIA LPPDLAPPLA VQAARSIGDA YVVAQQLAEG PAAALIGAGQ AAFSVAHRVL LNTSAALIGL LAVAVFILLA GYRGGPGAAA GGH
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