Gene Aave_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2158 
Symbol 
ID4669007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2369831 
End bp2371372 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content73% 
IMG OID639823363 
Productmajor facilitator superfamily transporter 
Protein accessionYP_970510 
Protein GI120610832 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.139146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGC TTACTTCTCC TGCTTCGTCC CCGATGCAGC GGTGGCTCGT CCTGGCGGCG 
GTGATGCTGG CCTTCCTGCC GGTGGTGATC GACATGACGA TCCTCCACAT CGCCGTCCCG
TCGCTGACGC TGGCGTTGAG CGCATCGGGC ACCCAGGTGC TCTGGATCAT CGACATCTAT
CCGCTGCTCA TGGCGGGCCT GCTGGTGCCC ATGGGAACGC TGGCGGACCG CACCGGTCAC
CGGCGGCTGC TGCTCGCCGG CCTGGCGGTC TTCGGCCTCG CATCGCTGCT GGCGGCATTC
GCTCCCAGCC CGGCGATGCT GATCGCGGCG CGCGTGCTGC TCGCGCTGGG CGGCTCGATG
ATCATGCCGT GCGTGCTCGG CATCATCCGC CGCACGTTCG AGGATGAACG GGAGCGCGCC
ATGGCGCTGG GCCTCTGGGG CACCGTGGGC GCGGCGGGGG CTGCCGTGGG GCCGCTGGTC
GGCGGGGCGC TGCTGGAGCA TTTCTGGTGG GGTGCCGCGT TCCTCATCAA CGTGCCGGTG
ATGCTGGTCG TGTTCCCGGC CGTGTTCCTG CTGCTGCCGC GGTCGGAGCG CACAGCGGCC
GGCCGGTGGC CTGCCGGGCA GGCACTGCTG CTGATCGCCG GCATGATCGC CGCGGTGTAC
GGCCTCAAGT CGGGATTCGG GGGCGGGCAG CCGCCGGCCG TGGCGGCATC GGCGCTGGCG
GCGGGAGCGG CCCTGCTGGC GGTGTTCGCG CGTCTGCAAC TGCGCTCGCC GACGCCGATG
CTGGACCTGT CGCTGTTCTC GCGCCCTGCG ATCCTTGCAG GCATCGCCAT GGCGGTGGTC
GCCACCGGCG CCCTGGCCGG GGTGGAGCTG ACACTGGCGC AGGAGCTGCA ATACGTGCTG
GGCAAGAGCC CGCTGCAGGC CGGCATCTTC ATGGTGCCGA TCATGGCCGC GGCAGCCGTG
GGCGGCCCCC TGGCCGGAAC CCTGTCGAAC CGCTTCGGAC TGCGCCGGGT CGCCAGCCTG
TCCCTGGCGG TGTCCGGCGC GGCCCTGGCC TACCTGGCCC GGGCGGACTT CCACGAGGGC
GGCGTGCCCG TGGCCGCGGC ACTGGCGCTG CTCGGTCTGG CGCTGAGCGT TGGGCTGACG
GCGTCGTCCA TCGCGATCAT GGGGTCGGTC GAGGCGGACA GGGCCGGCGC GGCCGGGGCG
CTGGAGGCCA CCGGCTACGA GCTGGGCAGC GGCCTGGGCA TCACCCTGTT CGGGGTGTTC
ATGTCCGTCG TGTTCAGCCA TGCGATCGCG CTGCCGCCGG ATCTCGCGCC GCCGCTCGCC
GTCCAGGCGG CCCGGTCGAT CGGCGATGCC TACGTGGTCG CGCAGCAACT GGCGGAGGGG
CCGGCGGCCG CGCTGATCGG GGCCGGGCAG GCAGCCTTCT CGGTCGCCCA TCGGGTGCTG
CTGAACACCT CCGCGGCGCT GATCGGCCTG CTGGCCGTGG CCGTGTTCAT CCTGCTGGCC
GGCTACCGTG GCGGGCCGGG AGCTGCGGCG GGCGGGCACT GA
 
Protein sequence
MSLLTSPASS PMQRWLVLAA VMLAFLPVVI DMTILHIAVP SLTLALSASG TQVLWIIDIY 
PLLMAGLLVP MGTLADRTGH RRLLLAGLAV FGLASLLAAF APSPAMLIAA RVLLALGGSM
IMPCVLGIIR RTFEDERERA MALGLWGTVG AAGAAVGPLV GGALLEHFWW GAAFLINVPV
MLVVFPAVFL LLPRSERTAA GRWPAGQALL LIAGMIAAVY GLKSGFGGGQ PPAVAASALA
AGAALLAVFA RLQLRSPTPM LDLSLFSRPA ILAGIAMAVV ATGALAGVEL TLAQELQYVL
GKSPLQAGIF MVPIMAAAAV GGPLAGTLSN RFGLRRVASL SLAVSGAALA YLARADFHEG
GVPVAAALAL LGLALSVGLT ASSIAIMGSV EADRAGAAGA LEATGYELGS GLGITLFGVF
MSVVFSHAIA LPPDLAPPLA VQAARSIGDA YVVAQQLAEG PAAALIGAGQ AAFSVAHRVL
LNTSAALIGL LAVAVFILLA GYRGGPGAAA GGH