| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2151 |
|---|
| Symbol | |
|---|
| ID | 4668989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2362171 |
|---|
| End bp | 2363217 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639823356 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_970503 |
|---|
| Protein GI | 120610825 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGA GTCAGCTCAT CCTCGGAATC GAATCCTCCT GCGACGAAAC CGGCGTGGCC
CTCGTGCGTG CGCCGGCGGA CGGCAGCGTG CCCACGCTGC TCGCCCATGC CCTGCACAGC
CAGATCGACA TGCACCAGGC CTATGGCGGC GTGGTGCCCG AACTGGCGAG CCGCGACCAC
ATCCGGCGCG TGCTGCCACT GACCGGGACC GTGCTGGCCG AGGCGGACTG CCGCCTCGCG
GAGGTGGACG TGGTGGCCTA CACGCGCGGG CCGGGCCTGG CCGGCGCGCT GCTCGTGGGG
GCGGGCGTGG CCTGTGCCCT GGGTGCGTCG CTGGACCGGC CGGTGCTGGG CGTGCACCAT
CTGGAGGGGC ATTTGCTGTC GCCCTTCCTG AGCGCCGACC CGCCGGAATT CCCCTTCGTC
GCGCTGCTGG TGTCGGGCGG CCACACCCAG TTGATGCGCG TGGACGGCGT GGGCCGCTAC
GAACTGCTGG GCGAGACCAT CGACGACGCG GCCGGCGAGG CCTTCGACAA GTCCGCCAAG
CTGCTGGGCC TGGGGTACCC GGGCGGGCCC GCGCTGTCCC GGCTGGCGGA GCAGGGCGAC
GCCGCGGCCT TCAAGCTGCC GCGGCCGCTG CTGCACAGCG GCAACCTGGA TTTCTCGTTC
GCCGGCCTCA AGACGGCCGT GCTCACGCAG GCGAAGAAGC TGGGCGACGA GCTGCCCGCG
CGCAAGGCCG ACCTGGCCGC CAGCACCCAG GCCGCCATCG TCGATGTGCT CGTGAAGAAG
ACGCTGGCGG CACTGCAGGC GTCCGGCCTG CGCCGCGTGG TGGTGGCCGG CGGCGTGGGG
GCCAACCGGC TGCTGCGCGC GCAGCTGGAC GCCGCCTGCG CCCGCATGGG CGTGCGCGTG
CACTATCCCG AACTCCACCT GTGCACCGAC AACGGCGCCA TGATCGCCAT GGCCGCCGCC
ATGCGCCTGC AGGCGGGGCG CGAGGCCCCC AACCGCGAGT ACGCGTTCGA CGTCAAGCCG
CGCTGGCCGC TGGACGCGCT GGCGTAG
|
|---|
| Protein sequence | MVKSQLILGI ESSCDETGVA LVRAPADGSV PTLLAHALHS QIDMHQAYGG VVPELASRDH
IRRVLPLTGT VLAEADCRLA EVDVVAYTRG PGLAGALLVG AGVACALGAS LDRPVLGVHH
LEGHLLSPFL SADPPEFPFV ALLVSGGHTQ LMRVDGVGRY ELLGETIDDA AGEAFDKSAK
LLGLGYPGGP ALSRLAEQGD AAAFKLPRPL LHSGNLDFSF AGLKTAVLTQ AKKLGDELPA
RKADLAASTQ AAIVDVLVKK TLAALQASGL RRVVVAGGVG ANRLLRAQLD AACARMGVRV
HYPELHLCTD NGAMIAMAAA MRLQAGREAP NREYAFDVKP RWPLDALA
|
|---|
| |