| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2140 |
|---|
| Symbol | |
|---|
| ID | 4667630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2353160 |
|---|
| End bp | 2353819 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639823346 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_970493 |
|---|
| Protein GI | 120610815 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.565614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.595745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTCGG GCAAGTGGGC GGATTCCCTC AAATTCTCCA TAGGGGGCCT GGCCTCGTTT
CTTGGCGGCC GGCGCTGGGG GCCGGCGCAC GACGAGTGGC TGAGGCCATG GCTTCCCCTG
CTTCGCCAGC ATGCAGGTGG CGGGGTGATC GCGGAACTCG GCTGCGGCAA TGGAGCAGAT
CTCGCGATGC TGGCCGCCGA AGGGTTTTCC GTGGTCGGCG TCGATCGATC ACCGGCGGCC
ATCGCCGAGG CGGGGAAAAG GATTTCGCCG CAGCTCCTGT ATCGCCAGGA TCTCCGCGAG
CAGTTTCCTG TGGCCGCCCA CAACGCGAGC GCCGTGATCG CAAGCCTGTC GCTGCACTAT
TTTTCCGTTG AACAGACAGA GGAGGTGATG CATCGCATAC GGGATTGCCT CGCTCCTGGT
GGCATCTTTC TTTGCCGCGT GAACTCGACG CAAGACGTTC ATTTCGGCGC GGCCGGTCAT
CGCCCGGTGG GAGAGGGCCA GTACCTCGTG CATGGCCAAT TGAAACGCTT TTTCGATGAA
GCGTCGGCCC GTTCGTTGTG CGGCGAAGGC TGGGACGTCA TCAGCATTCA GGAAAAGACG
ATACAGCGCT ATGCGCTGCC CAAGGTTGTC TGGGAAATCG TCGCGCGCCG CTCTGGTTGA
|
|---|
| Protein sequence | MLSGKWADSL KFSIGGLASF LGGRRWGPAH DEWLRPWLPL LRQHAGGGVI AELGCGNGAD
LAMLAAEGFS VVGVDRSPAA IAEAGKRISP QLLYRQDLRE QFPVAAHNAS AVIASLSLHY
FSVEQTEEVM HRIRDCLAPG GIFLCRVNST QDVHFGAAGH RPVGEGQYLV HGQLKRFFDE
ASARSLCGEG WDVISIQEKT IQRYALPKVV WEIVARRSG
|
|---|
| |