| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2127 |
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| Symbol | |
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| ID | 4666922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2340070 |
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| End bp | 2342316 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639823334 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_970481 |
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| Protein GI | 120610803 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.519632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC GCGTCACCAT CCAGACGCCC CTGGGAGAGC AGCTGCAGTT CCGGCAGTTG
CGGGGCAGCG AGGAGCTGAG CCAGCTTTTC TCCTTCGACA TCGACCTGCT CTCGGAGGCC
CGGGACATCG ATCCCAAGGC ACTGCTGGGC AAGACGGCGA CGGTGGAGAT CGAGACCGAA
GGCGGCGGCA AGCGGTACCT GGACGGCCTG GTCACGCGCT TCGGCATGCA GGGGCAGGAC
CACCGGCTCT ATTCGTACCA CCTGCGCCTG CAGCCCTGGC TCTGGGTGGC CACGCGGCGG
CAGGATTTCC GCATCTTCCA GTTCAAGACC GTCCCGCAGA TCGTGCAGGA GGTGCTGGGC
CGCTACGGCT ACCCGATGCA GTTGAAGCTC ACACGCGCGT ACCGCGCCTG GGACTACTGC
GTGCAGTACG GCGAGCGCGA CTTCGACTTC GTCTCCCGGT TGCTGGAGCA TGAGGGGGCT
TATTACTACT TCCAGCACGC GAGCGGCCAG CACACCCTGG TGATCGCAGA CGACATCGTG
GCCGGCCACG AGCCCCTGCC GGGCGCGGCC GTGATCCCGT TCTACCCGCC CGAGAAGTCG
GCCGTGGCCG ACCGCGAGAA CATCCACGCC TGGACGCTGG GCGAGGAGAT CAAGCCGGGC
CGGTACTACA ACGACGACTA CGACTTCAAG AAGCCGAGGT CGGACCTCTC CAACATGCGC
CAGCAGCCGC CAGGGCATGC GCACGATGCG TACGAGATCT ACGAATGGCC GGGCGGCTAC
GTGCAGCACG GCGACGGCGA GCAGTACACC CGCGTGCGGC TGCAGGAAGG CCTGACCGGG
CACAGCACCG TCCGGGGCGA ATCGCGCCAC AGGAGCCTGG CGCCGGGCTA CACCTTCACG
CTGGAGAACT ACCCGCGCGG CGACCAGAAC CGGCAGTACC TCATCACGGG CGTCACCTAC
CACCTGCACG AGAACCCGCG AAGCTCATCC TTCAACAGCG CCAAGCCGGG GGAATCGCTC
AAGCACAACG AAGAGCAGGG GTCGTTCCAG AAGTTCAGCC TCACGGCCCA GCCCACGAGC
CTGCCCTATA CCCCCGCAAG AAAAACCCCC AAACCCCGTA CCACCGGCCC GCAGACCGCC
GTGGTCGTCG GCCCGGCCGG CGAGGAAATC TGGACCGACG AATACGGCCG CATCAAGGTG
CAGTTCCACT GGGACCGGCT GGGGGCGATG GACGAGAACT CCAGCTGCTG GATGCGGGTG
GCCACGAGCT GGGCGGGCTC TGGGTTCGGG GCGATCTCGA TCCCCCGCAT AGGCCAGGAG
GTCATCGTGG ACTTCCTGAA CGGCGACCCG GACTACCCGA TCGTCACGGG CAGCGTCTAT
AACGCCGCGA ACATGCCACC CTGGGCCTTG CCGGGCAATG CCACGCAGTC GGGCATCAAG
ACCAAGTCGA GCAAGGGGGG CGCCTTCGGC GACGGGATGA AGAACGGCGC GGGCGACGCC
AACGCGATCC GCTTCGAGGA CAAGAAAGGC GCGGAGCAGC TGTGGCTGCA TGCGCAGAAG
GACCAGCTCA CCGAAGTCGA GAACGATGAG GATAAGTGGG TGGGAAATGA CCGGCGAAAA
ACGATCGACC GGGACGAGAC CACCATCGTG CATCGCGACC GGACAGAAAC TGTAGACCGC
GACGAGAAGA TCACGGTGCA CAACAACCGC ACCGAGCGGG TGGACCACGA CGAGACGATC
TCGATCGGCG ACAACCGCCG CGAGGACGTG GGCATCGACG AGACGGTCTC GATCGGCAAA
AACCGTAGCA AAACCATTGG CCGCAACGAG AAGGACAAGA TCGGCAACAA CTGGTCGATC
AAGGTCGGCA GTTTCAAGAC CGAGACCATC GGCCTGGCCT ATCTGCAGAA CGTGGGCCTG
GCAAAGATGA TGAACATCGG CGCGGCCTAC AACGTGAACG TGGGCGCGGC CATGGTGGTC
AACGTAGGCC TGACGCAGAG CACGAATGTG CTCCTGGGTC GCTCGGTTAC TGTGGGGCAG
AGCCAGACGA CCAAGGTGGG AGAGGACTGG ACCCAGACGA CCGGAAAGAA CATCCGTATC
CAGGCTGGCG ATTCCATCGA ACTGGTATGT GGTGCTTCGG TACTCAGGAT GGAAAAGGGC
GGCCAAGTCA CCATCAACGG CAAGGAAATC GATGTAGTCG GGACCAAGCA CATTGGGCTG
GATTCCAAGC GCATCGACCT GAATTGA
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| Protein sequence | MTRRVTIQTP LGEQLQFRQL RGSEELSQLF SFDIDLLSEA RDIDPKALLG KTATVEIETE
GGGKRYLDGL VTRFGMQGQD HRLYSYHLRL QPWLWVATRR QDFRIFQFKT VPQIVQEVLG
RYGYPMQLKL TRAYRAWDYC VQYGERDFDF VSRLLEHEGA YYYFQHASGQ HTLVIADDIV
AGHEPLPGAA VIPFYPPEKS AVADRENIHA WTLGEEIKPG RYYNDDYDFK KPRSDLSNMR
QQPPGHAHDA YEIYEWPGGY VQHGDGEQYT RVRLQEGLTG HSTVRGESRH RSLAPGYTFT
LENYPRGDQN RQYLITGVTY HLHENPRSSS FNSAKPGESL KHNEEQGSFQ KFSLTAQPTS
LPYTPARKTP KPRTTGPQTA VVVGPAGEEI WTDEYGRIKV QFHWDRLGAM DENSSCWMRV
ATSWAGSGFG AISIPRIGQE VIVDFLNGDP DYPIVTGSVY NAANMPPWAL PGNATQSGIK
TKSSKGGAFG DGMKNGAGDA NAIRFEDKKG AEQLWLHAQK DQLTEVENDE DKWVGNDRRK
TIDRDETTIV HRDRTETVDR DEKITVHNNR TERVDHDETI SIGDNRREDV GIDETVSIGK
NRSKTIGRNE KDKIGNNWSI KVGSFKTETI GLAYLQNVGL AKMMNIGAAY NVNVGAAMVV
NVGLTQSTNV LLGRSVTVGQ SQTTKVGEDW TQTTGKNIRI QAGDSIELVC GASVLRMEKG
GQVTINGKEI DVVGTKHIGL DSKRIDLN
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