Gene Aave_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2118 
Symbol 
ID4666522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2329493 
End bp2331835 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content72% 
IMG OID639823326 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_970473 
Protein GI120610795 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.521154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.637392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC GCTTGCGCAT CACCCTGCTG ATCGTTCTCG CCTTTCTCGC ACTGTGCTCC 
GTCGGGGGCT TCGCGCTCTA CCGTTCGGCG GAGGGGGCCC GCCAGGTCAA GCGGGTGACC
GAGGGCGTCG TGCCCAGCGC CATCCATTCC GTGGAGCTCA TGGGCCAGCT CAAGGACGTG
CAGATGGCCG CGCTGGGCAT GGTGTCCGCG AGCGACGCGG ATGCCGCGCA GAAACTGCAC
GAGCAACTGG TGGAGCGCAA GGCGGTGCTG CAGAAGGCGC TGGACAAGCA GCTCCAGGAG
GCCGACAGCG ATGCGCAGCG CGGCCTGGTG AAAGAGGCCG CCATGAGCCT GGAGAACTAC
TTCGCGGCCA TCGACGACAC GGCGCGCTTC AAGCTCGCCG GCCAGCAGGA CGCGGCCGAG
GCCTTCATGG CCGCCACGGT GGACCAGTAC CTGCGCGAGC AGGGCCAGAT GATCGAGGCC
ATCCAGGTGG AGAAGCGCCG CACCAAGGAC GAGGCCATCG GCTCGCTCAA CGCCCAGCTG
GAGCACACCA CGACCACGCT GCTGGCCGTG GCCGCCGTCG CCATCCTGGG CCTGGCCGCC
GCGGGCTACC TGCTCTACCG CCAGATCGTG CGCCCCATCC GCGAGATGGA GCTCAAGATG
ACCGAGATCG CCACGAGCCA GGATTTCTCG CACCGCGTGC CCGTCACCCG CATGGACGAA
ATCGGCCGCT CGCTCACCGC CTTCAACGCG ATGGTGGAGA AGATCCAGGA AAGCTCCGAG
CTGGTGCGCC GCAAGACGGC CGACATCCAG GCCATGCTGC ACACCATTCC CCAGGGCATC
CTGACCCTGC AGGCCGGGCG CACCATCCAC CCCGAATACT CGGACCACCT CGCGCGCATC
CTGGAAGAGG ACGGCATCGC CGGCCGCACG CTCGATGCGC TGCTGTTCGA CCGCTCCGAC
CTGAGTGCCG ATGCGCGCGC CCAGGCCCTG GCTGCGATCG ACGCCTGCAT CGGCGAGGAC
GAACTCAACT TCTCGTTCAA CGCCCACCTG CTGCCGCAGG AGTTGCAGGC GCGCTTCGGC
GGCGACCGCG TGAAGGTGAT CGAGCTGGGC TGGTCGCCCA TCACGGCTGC CGACGGCACC
GTGGAGCGCC TGCTGCTGAG CCTGCGCGAC GTGACGGAGC TGCGCGAGCT GGCGCGGGAC
GCCCAGGCGC GCAAGGAGGA ACTGGCCATG GTCGGCGAAC TGCTGGGCGT GGCGGCGGAC
AGGTTCCGCG AATTCTCCGA AAGCGCCGGG CGCCTGCTGC AGGACAACCG GGCGCTGCTC
GGCTCCGCGG TGTCGCGGCC CGATGCGCGG CCGGACGCCC TGGCGGCTCT GTTCCGCCAC
ATGCATACCG TCAAGGGCAA CGCCCGCACC TACGGCCTGC TGCGCATCGC CGATGCGGCG
CATGTGGCAG AGCAGCGCTA CGCGGCGCTG CGGGACGACC CTGCCGGCTG GGGCGATGCC
GTCCTGCAGT CCAGGCTGGA GGCCGAACTC GAGGCGGTGG CCGGGGCCCT CCAGGCCTAT
GTGCGCGTGA ATGACGGCAC CCTGGGGCGC GGCGCGGGCC ACGCGGTGGG CGATGCGCAG
ACGGTGCAGC TGCCGCGCGC CCGCATCGAG GAACTGTGCG CGCGCATCGG CGCCCTGGCG
CGGGACCCCG GCTGCACGCC GGCCCACCGC GCCGCGCTGG AGCGCATCGC CGCCGCGCTC
GCCGACGCCG ACGCGGCCGG GCTGGACGAA GTGGTGGGCG GCGTGGCCGC CTCCCTGCCG
GCGCTGGCCC GGGACCTGGG CAAGGAGGCC CCGGAGGTCG TCCTGCAGTC CGGCGTGCCC
GTGGCCGTGA AGCCGCAGGC CGCCGATGCG CTGCGCAATG CCTTCATGCA CCTGCTGCGC
AATGCGCTGG ACCATGGCAT CGAGCCCGCG GCCGAGCGCG CAGCGCGCGG CAAGCCCGCC
GCGGGCCGCA TCCGCATCGG CGCCGCGCTG GATGCGCAGG AACTGGAAAT CCGGCTCGCC
GACGACGGCC GCGGCCTCGA CCTGGACCGC ATCCAGGCCC AGGCCCGCGC GCGGGGCCTG
ATCGCGGAAG ACGCCACGCC CGCGCCCGGG GACGTCGCCC ACCTGATCTT CGCGCCGGGC
TTTTCCACGG CCGGGGAGGT GACGGCCGTG TCGGGCCGCG GCGTGGGAAT GGATGCGGTC
AAGGCTTTCG TGGAATCGCT GGGCGGCCGC ATCCAGCTGG TGCTGGCCGG CGGCGCCCCG
CGCGCGGCCA CGCCGTTCGA AACCGTGCTG CGCCTGCCCG CCCGCTGGGC GGTGGTGGCC
TGA
 
Protein sequence
MTVRLRITLL IVLAFLALCS VGGFALYRSA EGARQVKRVT EGVVPSAIHS VELMGQLKDV 
QMAALGMVSA SDADAAQKLH EQLVERKAVL QKALDKQLQE ADSDAQRGLV KEAAMSLENY
FAAIDDTARF KLAGQQDAAE AFMAATVDQY LREQGQMIEA IQVEKRRTKD EAIGSLNAQL
EHTTTTLLAV AAVAILGLAA AGYLLYRQIV RPIREMELKM TEIATSQDFS HRVPVTRMDE
IGRSLTAFNA MVEKIQESSE LVRRKTADIQ AMLHTIPQGI LTLQAGRTIH PEYSDHLARI
LEEDGIAGRT LDALLFDRSD LSADARAQAL AAIDACIGED ELNFSFNAHL LPQELQARFG
GDRVKVIELG WSPITAADGT VERLLLSLRD VTELRELARD AQARKEELAM VGELLGVAAD
RFREFSESAG RLLQDNRALL GSAVSRPDAR PDALAALFRH MHTVKGNART YGLLRIADAA
HVAEQRYAAL RDDPAGWGDA VLQSRLEAEL EAVAGALQAY VRVNDGTLGR GAGHAVGDAQ
TVQLPRARIE ELCARIGALA RDPGCTPAHR AALERIAAAL ADADAAGLDE VVGGVAASLP
ALARDLGKEA PEVVLQSGVP VAVKPQAADA LRNAFMHLLR NALDHGIEPA AERAARGKPA
AGRIRIGAAL DAQELEIRLA DDGRGLDLDR IQAQARARGL IAEDATPAPG DVAHLIFAPG
FSTAGEVTAV SGRGVGMDAV KAFVESLGGR IQLVLAGGAP RAATPFETVL RLPARWAVVA