| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2112 |
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| Symbol | |
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| ID | 4665666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2320676 |
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| End bp | 2322028 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639823320 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_970467 |
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| Protein GI | 120610789 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCA CGCCCTCCTG CTCCGCCCCC CGCTTCGCCG TCCCTCCCGT TTCCGCCGCT
GCCTTTCCGC TCGAACGACC GTCGCGCACT CCCACGGTCG CGCTGGAGGG TGGCCGCGCC
CGTGGCGCAC GGCGGATCCG CGCCGCGTGG CTGGTGCTGG GCCTGGGGAC GATCCTGGCC
GGCTGTTCGG ACAAGGCCCC GGCGCCGGCG CCGCGCGGCC CCGTGGAAGT GGGCGTGGTC
ACGCTGCAGC CCGAGCGCCA GTCCGTGACC ACCGAATTGC CGGGACGCAC CAATGCCTAT
CTCGTGGCCG AGATCCGGCC CCAGGTGGGC GGGATCGTGC AGAAACGACT GTTCACGGAG
GGCGCGGAAG TGAAGGCGGG CCAGGCGCTC TACCAGCTCG ACCCGGCGCC GCTGGAGGCG
GCCCTGGCCA GCGCCGAGGC CTCGCTGGGC CGGGCCCAGG CCACCGCCGC ATCGGCGGAG
TCGAACGCGC GGCGCAATGC CGAGCTGGCG AAGATCGAGG CCGTCAGCCG GCAGGTGGCG
GACGACAGCC AGGCGGCGGC CCAGCAGGCG CGCTCGGATG TGGCCGTGGC ACGCGCCGCG
GTGGCCACGG CGCGCATCAA CCTGGGTTAC GCGCGCATCC AGTCGCCCAT CTCCGGCCGC
ACGGCGACGT CCAGCGTCAC GCCCGGGGCC CTGGTCACCG CCAACCAGGC GACCGCCCTC
ACCACCGTCT CGCAGGTCGA TCCGCTCTAC GTGGACGTCA CCCAGTCGAG CACCGACGTG
CTGCGCTGGA AGACCGAACT GGCGAATGGC CGGCTGCAGC GCGTCGGGGA GGGCCAGGCG
CGCATGCGGC TCAGGCTCGA GGACGGCAGC ACCTATGCCC ACGCCGGCCG GCTGCAGTTC
AGCGGCATCA CGGTCAATCC GACGACCGGC GCGGTCACGC TGCGCGGCGT GGTGCCCAAC
CCGGACGGGC TGCTCATGCC CGGCATGTAC GTGCGCGCCG TGCTGGAGAC CGGCGTGAAC
GAGCAGGCGC TGCTCGTGCC GCAGCAGGGC GTGACGCGCG ACGCCGCCGG CAATGCCAGC
GTGCTGGTCG CCAACGCGCA GGACCAGGTG GAGCGCCGCG GCATCGAGGT GGGCGCGGCC
GTGGGCAATC GCTGGGTGGC GACGGCGGGC ATGGCGCCGG GCGACCGCGT CATCGTGGAC
GGCCTGCAGC GCATCCAGCC GGGCGACGCG GTGAAGCCGG TGGAGGTGAA GAGCCTGCCG
CAGGGCGCCG CGCTCTCGCC CTCCCAGGGA ACATCGGCGC CGGCACCCGC TGCCCCCGGC
GCCGCGGGCA GCGCCCCGGC GGCCGCGCGC TGA
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| Protein sequence | MNSTPSCSAP RFAVPPVSAA AFPLERPSRT PTVALEGGRA RGARRIRAAW LVLGLGTILA
GCSDKAPAPA PRGPVEVGVV TLQPERQSVT TELPGRTNAY LVAEIRPQVG GIVQKRLFTE
GAEVKAGQAL YQLDPAPLEA ALASAEASLG RAQATAASAE SNARRNAELA KIEAVSRQVA
DDSQAAAQQA RSDVAVARAA VATARINLGY ARIQSPISGR TATSSVTPGA LVTANQATAL
TTVSQVDPLY VDVTQSSTDV LRWKTELANG RLQRVGEGQA RMRLRLEDGS TYAHAGRLQF
SGITVNPTTG AVTLRGVVPN PDGLLMPGMY VRAVLETGVN EQALLVPQQG VTRDAAGNAS
VLVANAQDQV ERRGIEVGAA VGNRWVATAG MAPGDRVIVD GLQRIQPGDA VKPVEVKSLP
QGAALSPSQG TSAPAPAAPG AAGSAPAAAR
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