| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2110 |
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| Symbol | |
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| ID | 4665459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2315898 |
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| End bp | 2317460 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639823318 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_970465 |
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| Protein GI | 120610787 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.277325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCG CGCCCTTTCC CTCCCTTTTC GCCTGCCCGC GCCTCGCCAG CGGGGCGGCC
CTGGCCGCCG CGCTGCTCGC GGCGGGCTGC ACCAACCTCG CGCCGCCGTT CTGGAAGCCC
GCGCTGCCCG TGCCGGAGGT GGTCGGTTCC CCGTCCACCC GCGGCACCGA CAGCGTGACC
TTCGGAATCG CGGTGGACAT CGGCCTGAGG CCCTGGGAGT CGTTCATCAC GGAGCCGCGG
CTGCGGGGCG TGATCGCGCA ATCGCTCGAA GCCAACCGCG ACCTGCGCGT GGCCGTGCTG
GCCATCGAGC GGGCCCGGGC CCAGTACGGC GTGAGCCGCG CGGACCTCTT CCCCACCGTG
GGCGCCACGG GCGCCGGCAC CCGCAGCCGC ACGGCCGACG ATCTCACCGC CGCCGGCCGC
GCCAGCACGG CCAGCCAGTA CAGCGCCCAG ATCGGCTTCG CGAGCTACGA GATCGACTTC
TTCGGCCGGG TGCGCAACCT CAACGATGCC GCGCTGCAGG AATTCCTGCG CGTGGGCGAG
AACGCGCGCA GCGTGCGCCT GAGCCTGGTG GCCGACGTGG CCGGCGCCTG GCTCGCGCTC
GACGCCGACG CGCGCCGCCT GCTGCTGGCG CGCGAAACGC TACGCACCCG GTCGCAGTCG
CTCGCCCTGG CGCGGCGCAG CTATGAACAG GGAGCCACCT CGGGCCTCAC GCTCACGCAG
ACGCAGGCCA CGGTCGATGC GGCGCGCGCC GACCTCGCCA GCGCCGCCAC CCAGCTCGCC
CGGGACCGCA ACGCGCTCCA CCTGCTGGCG GGACGCCCCG TGGACGATGC CCTGCTGCCG
CCCGCGGCCG TGGAGGCGCT GGCGCCGCCG CCCGCGGAAA CCGGGGCCTC CGCGCCGGGC
GGCGACCGCG CCGGCAGTCC CGATCCGGCG CGCTCGCAGC GGCCCGCGGT GTCGGTGGCG
CAGGCCCTGG CGGTGCCCGC GGGCTCGCTG CCGTCTTCCA CGCTGCTGCA CCGCCCGGAC
GTGCAGGCGG CCGAGCGCTC GCTGCGGGGC GCGTTCGCCA ATATCGGCGC CGCGCGCGCC
GCGTTCTTCC CTTCCATCAC GCTCACCACC AGCGTGGGCA CGGCGAGCAA CGAACTGTCG
GGACTTTTCG GCGCGGGCAA CGGCACCTGG AGCTTCGCGC CGCAGATCCG CCTGCCGATC
TTCGACGGCG GGCGCAACCG GGCCAACCTG CGCGTGGCCG AGGTCGCGCG GGAAACCGCC
CTGGCCCAGT ACGAGAAGAC CGTGCAGACG GCCTTTCGCG AGGCAGCGGA CGCGCTGGCC
GAGCGCGCCA CGCTGCAGGA GCGCCTGCAG GCGCAGCAAT CCCTCGTGGA CTCCAGCCAG
CGCGCGCTCG ACCTGACCCT GGCCCGGTGG CGGCTGGGCG CCGACAGCTA CCTGGCCGTG
CTGGATGCGC AGCGCTCGCT CTACACCGCG CAGCAGGGGC TGATCGGCGT GCAACTGGCC
GACCAGTCCA ACCGGGTCAC GCTCTACAAG GTGCTCGGTG GATGGGGCGA CAGCGACGGC
TGA
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| Protein sequence | MTRAPFPSLF ACPRLASGAA LAAALLAAGC TNLAPPFWKP ALPVPEVVGS PSTRGTDSVT
FGIAVDIGLR PWESFITEPR LRGVIAQSLE ANRDLRVAVL AIERARAQYG VSRADLFPTV
GATGAGTRSR TADDLTAAGR ASTASQYSAQ IGFASYEIDF FGRVRNLNDA ALQEFLRVGE
NARSVRLSLV ADVAGAWLAL DADARRLLLA RETLRTRSQS LALARRSYEQ GATSGLTLTQ
TQATVDAARA DLASAATQLA RDRNALHLLA GRPVDDALLP PAAVEALAPP PAETGASAPG
GDRAGSPDPA RSQRPAVSVA QALAVPAGSL PSSTLLHRPD VQAAERSLRG AFANIGAARA
AFFPSITLTT SVGTASNELS GLFGAGNGTW SFAPQIRLPI FDGGRNRANL RVAEVARETA
LAQYEKTVQT AFREAADALA ERATLQERLQ AQQSLVDSSQ RALDLTLARW RLGADSYLAV
LDAQRSLYTA QQGLIGVQLA DQSNRVTLYK VLGGWGDSDG
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