Gene Aave_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2103 
Symbol 
ID4665581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2304944 
End bp2305804 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content73% 
IMG OID639823311 
Producturoporphyrinogen-III C-methyltransferase 
Protein accessionYP_970458 
Protein GI120610780 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.161364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.623336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTT CCGTCCCTCC CTCGCAGACC GCCCCCACCG CACCGGCCCG CCCCTATGGC 
GCCGCGCCGC GCGGCACCTG CACGCTCGTC GGCGCGGGAC CGGGCGACCC CGAACTGCTC
ACCCTCAAGG CCCTCAAGGC CATCCAGGCG GCCACCGTGC TGCTGGTGGA CGACCTCGTC
AGCGACGAGA TCGTCGCCCT CGCCGCGCCC GGTGCGCGGG TGGTGCACGT CGGCAAGCGC
GGCGGCTGCA AGAGCACGCC GCAGGCCTTC ATCGAGAAGC TCATGGTCAT GGCCGTGAAC
GAAGGCGAGA ACGTGGTGCG GCTCAAGGGC GGCGATCCTT TCATCTTCGG GCGCGGCGGC
GAAGAGGTCG AGCACCTGCG CGCGGCCGGC ATCGAGGTCA CCGTGGTCAA CGGCATCACG
GCCGGCCTGG CGGGCATGAC CCTGCTCGGC ACGCCGCTCA CGCACCGCGA GCACGCCCAC
GGCGTGGTCT TCGTCACCGG CCACGCCAAG CCCGGCGACA GCGGCATCGA CTGGCGCCAG
CTCGCCGCCA CGGCCCGCGC CGCGCGCCTG ACGCTGGTGA TCTACATGGG CGTGAGCAGC
GCCGCGCACA TCCAGGAAGA ATTGCTCACC GGCCTGCCGG CCTGCACCCC CGTGGTCATC
ATCCAGCACG TGAGCCTGCC CTGCCAGCGC CACGCGCTCA CCACGCTGGG CGAGCTGCAC
GCCACCATCG AGCGCGAACA GCTCGGCAGT CCCTCGGTCA TCGTGGTGGG CGACGTGGCC
GCCGGCGTGG CAGCCGCGGC CGGCGACGGC CTGGGACAGC CCCTGCCGGT GGCGCCACCG
CCGCTGCGGC ACGCCGGCTG A
 
Protein sequence
MNRSVPPSQT APTAPARPYG AAPRGTCTLV GAGPGDPELL TLKALKAIQA ATVLLVDDLV 
SDEIVALAAP GARVVHVGKR GGCKSTPQAF IEKLMVMAVN EGENVVRLKG GDPFIFGRGG
EEVEHLRAAG IEVTVVNGIT AGLAGMTLLG TPLTHREHAH GVVFVTGHAK PGDSGIDWRQ
LAATARAARL TLVIYMGVSS AAHIQEELLT GLPACTPVVI IQHVSLPCQR HALTTLGELH
ATIEREQLGS PSVIVVGDVA AGVAAAAGDG LGQPLPVAPP PLRHAG