Gene Aave_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2101 
Symbol 
ID4668535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2302576 
End bp2303082 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID639823309 
Productthioesterase superfamily protein 
Protein accessionYP_970456 
Protein GI120610778 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0616916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.421094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC CCCACAGTCC AGCCCACCAG CTCAGCATGA CGGTGCTCAT GTCGCCCGAC 
ATGGCCAATT TCTCCGGCAA TGTGCATGGG GGCGCGGTCC TCAAGCTGCT GGACCAGGTC
GCCTACTCCT GCGCGGCCCG CTATTCGGGC AGTTACGTGG TCACGCTGAG CGTGGACCAG
GTGACCTTCC TGCAGCCGAT TCACGTGGGC GAGCTGGTCA CCTTCCTGGC GAGCGTGAAC
TACACCGGCA CCTCGTCGAT GGAGATCGGC ATCAAGGTGG TGGCCGAGGA GATCCGCACC
CAGATCGTGC GGCACGTGAA CAGTTGCTTC TTCACGATGG TGGCTGTGGA CGAGGCCCGC
AAGCCCACGC CGGTGCCGCC GTTGTCGCCC TCCACGGCGG ACGAGCGGCG GCGCTGGGAG
GCGGCGCTGC TGCGCAAGAG CCTGCGCAAG GAGCAGGCGG AGCGTTTCGC TCAGATCCAG
CGCGAGGCGG CGCTGGTGCA CGGCTGA
 
Protein sequence
MTMPHSPAHQ LSMTVLMSPD MANFSGNVHG GAVLKLLDQV AYSCAARYSG SYVVTLSVDQ 
VTFLQPIHVG ELVTFLASVN YTGTSSMEIG IKVVAEEIRT QIVRHVNSCF FTMVAVDEAR
KPTPVPPLSP STADERRRWE AALLRKSLRK EQAERFAQIQ REAALVHG