Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2092 |
Symbol | rpsU |
ID | 4666642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2295139 |
End bp | 2295351 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639823301 |
Product | 30S ribosomal protein S21 |
Protein accession | YP_970448 |
Protein GI | 120610770 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0828] Ribosomal protein S21 |
TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.224762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA TCCGTGTAAA AGAGAACGAA CCCTTCGACG TGGCACTGCG CCGCTTCAAG CGCACCATCG AAAAGCTGGG CCTGCTGACC GACCTGCGCG CCCGTGAGTT CTACGAAAAG CCGACGGCCG AGCGCAAGCG CAAGAAGGCT GCCGCCGTGA AGCGCCACTA CAAGCGCGTT CGCAGCATGC AGCTGCCCAA GAAGCTGTAC TGA
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Protein sequence | MTTIRVKENE PFDVALRRFK RTIEKLGLLT DLRAREFYEK PTAERKRKKA AAVKRHYKRV RSMQLPKKLY
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