| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2087 |
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| Symbol | |
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| ID | 4667387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2290856 |
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| End bp | 2291953 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639823296 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_970443 |
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| Protein GI | 120610765 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.136469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC CCTCCCGCAC CTTCAAGATC GCCGTCCTGC CCGGCGACGG CATCGGCAAG
GAAGTCATGC CCGAGGGGCT GCGGGCGATC CAGGCGGCGG CCGAGCGTTT CGGCTTCGCG
CTGGAGCTGC ACACCTTCGA GTGGGCCAGC TGCGACTACT ACCTCGCGCA CGGGCAGATG
ATGCCCGACG ACTGGAAGGA GCAGCTCAAG GGCATGGACG CGCTCTTCTT CGGCGCCGTG
GGCTGGCCGG CCACCGTGCC CGACCACGTC TCGCTGTGGG GCTCGCTGCT GAAGTTCCGC
CGCGAGTTCG ACCAGTACAT CAACCTGCGG CCCGTGCGCC TGTTCGAGGG CGTGCCGTGC
CCGCTGGCGG GCCGCAAGCC CGGGGACATC GACTACTACG TGGTGCGCGA GAACACCGAG
GGCGAGTACA CGTCGCTGGG CGGCATCATG TACGAGGGCA CGGACCGCGA GATCGTGATC
CAGGAGTCGG TGTATTCGCG CAAGGGCGCC GAGCGGCTGC TGAAGTTCGC GTTCGATCTC
GCGCAGAGCC GCCCGAAGAA GCACGTGACG CTGGCCACCA AGAGCAACGG CATCGCCATC
AGCATGCCGT GGTGGGACCG GCGGGCCGAC GAGGTGGCCA GACAGTATCC CGGCATCACG
CTGGACAAGC AGCACATCGA CATCCTGACG GCGCGCTTCG TGCTGCAGCC GGGGCGCTTC
GACGTGGTGG CGGCGACGAA CCTGTTCGGC GACATCCTGT CGGACCTGGG GCCGGCGACG
ACGGGCACGA TCGGGCTGGC GCCGTCGGCG AACCTGAACC CGGAGCGCAC GTTCCCGAGC
CTGTTCGAGC CGGTGCACGG CTCGGCGCCG GACATCTACG GCAGGAACAT CGCCAACCCG
ATCGCGATGG TGTGGTCGGG GGCGCTGATG CTGGACTTCC TGACGCAGGG CCAGGGGGCG
GGGCGGCAGG CGCACGATGC GATCGTGGCG GCCATCGAGC AGGTGATCCA GAGCGGGCCG
AAGACGCCGG ACCTGGGCGG CACGGCCAGC ACCACGCAGG TGGGCGAAGC CATCGCGGCG
GCCATCGCCC GGAGCTGA
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| Protein sequence | MTTPSRTFKI AVLPGDGIGK EVMPEGLRAI QAAAERFGFA LELHTFEWAS CDYYLAHGQM
MPDDWKEQLK GMDALFFGAV GWPATVPDHV SLWGSLLKFR REFDQYINLR PVRLFEGVPC
PLAGRKPGDI DYYVVRENTE GEYTSLGGIM YEGTDREIVI QESVYSRKGA ERLLKFAFDL
AQSRPKKHVT LATKSNGIAI SMPWWDRRAD EVARQYPGIT LDKQHIDILT ARFVLQPGRF
DVVAATNLFG DILSDLGPAT TGTIGLAPSA NLNPERTFPS LFEPVHGSAP DIYGRNIANP
IAMVWSGALM LDFLTQGQGA GRQAHDAIVA AIEQVIQSGP KTPDLGGTAS TTQVGEAIAA
AIARS
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