| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2085 |
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| Symbol | |
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| ID | 4668231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2288153 |
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| End bp | 2289658 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639823294 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_970441 |
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| Protein GI | 120610763 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00714059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.900579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCCG GCAGCGATAT CCCCGCCCGT CTCGATCGGC TTCCCTGGTC CGCCTGGCAC
TGGCGCGTGG TGATCGCGCT GGGCATCGCC TGGGTGCTCG ACGGGCTGGA AGTGACCATC
GTCGGCTCCC TGGGCAGCGC GCTGGAGCGC CCCGACACGC TGGGGCTGAC GGCGTCGCAG
GTGGGCTGGA CGGCCTCGCT GTACGTGGCC GGCGCGGTGA TCGGTGCCCT CGTGTTCGGC
CGCATGGCGG ACGCGCTGGG GCGCAAGCGC CTCTTCATGC TGACCCTGAC GGTGTACATG
GTGGCGACCG TGGCCACGGC CTTCACCAGC AGTTTCGCCG CGTTCGCGGT GTGCCGCTTC
CTGACGGGCA TCGGCATCGG CGGTGAATAC GCGGCGATCA ATTCCGCCAT CGACGAACTC
ATTCCCGCAC GGGTGCGCGG CCGCGTGAAC CTGGCCATCA ACGGCAGTTT CTGGCTGGGC
GCGGCCCTGG GGGCCGCCCT GAGCCTGGTG CTGCTGGACG CGCGCGTGCT GGGCCCGGAG
TACGGCTGGC GGGCCGCCTT CCTCATGGGC GCTCTGCTGG GCGCCGCCGT GCTGCTGGTG
CGACGGCACG TGCCGGAAAG CCCGCGCTGG CTGATCACCC ACGGCCGCGC CGACGAGGCC
GAACGCATCG TGGCGGACAT CGAGCGCGGC GTGCATGGCA CAACGAATCC GCGCCCAGCC
GGGCCCGCGG CCGCGGCCGC CCCCGCCATG CCCCGCGCGA CCCCGGAAGT CCCGGCCGGC
GCGGCTGGCC CGGCAGAACC GCCTGGCCGC CGCACGCTGC CCTCCGCGTC GCAGGTGGTC
CAGGTGCTGC TGCGCCGCTA CCCGGAGCGC AGCGCCGTGG TGCTGGCGCT GATGGTGTCG
CAGGCGTTCT TCTACAACGC GATCTTCTTC ACCTACGCGC TGGTGCTGAC GCGCTTCTAC
GGCGTGGACG CCAGCCGGGT GGGCCTCTAC ATCTTCCCCT TCGCCGCCGG GAACGTGCTG
GGCCCGCTGC TGCTGGGGCC CCTCTTCGAC CGCATCGGGC GGCGCGTGAT GATTACCGCC
ACCTATGCGC TCGCGGGCAT CGCGCTTGCG CTCACCGGCC TGGGCTTCAT GAACGGCTGG
CTGGATGCGA CCACGCAGAC CGTGGCCTGG TCGGTGGTGT TCTTCCTGGC CTCGGCCGCC
GCGAGTTCCG CGTACCTCAC CGTGAGCGAG GTGTTCCCGC TGGAGATGCG CGCGCTGGCG
ATTTCCCTCT TCTACGCCGT GGGCACCGGC GTGGGCGGTT TCGCGGCCCC GGCCCTGTTC
GGCGCGCTGA TCGATACCGG CAGCCGGGAG AACGTGTTCA TGGGTTACCT GCTCGGCGCG
GCGCTGGTGC TGCTGGCGGC GGGCGTGACG TGGCGCTGGG CGGTGGATGC GGAGCGGAAA
TCGCTGGAAG AGATCGCGCC GCCGCTGGGA AGCGACGGCA ACGGTGATTC GTTGAATCGC
CGTTGA
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| Protein sequence | MSPGSDIPAR LDRLPWSAWH WRVVIALGIA WVLDGLEVTI VGSLGSALER PDTLGLTASQ
VGWTASLYVA GAVIGALVFG RMADALGRKR LFMLTLTVYM VATVATAFTS SFAAFAVCRF
LTGIGIGGEY AAINSAIDEL IPARVRGRVN LAINGSFWLG AALGAALSLV LLDARVLGPE
YGWRAAFLMG ALLGAAVLLV RRHVPESPRW LITHGRADEA ERIVADIERG VHGTTNPRPA
GPAAAAAPAM PRATPEVPAG AAGPAEPPGR RTLPSASQVV QVLLRRYPER SAVVLALMVS
QAFFYNAIFF TYALVLTRFY GVDASRVGLY IFPFAAGNVL GPLLLGPLFD RIGRRVMITA
TYALAGIALA LTGLGFMNGW LDATTQTVAW SVVFFLASAA ASSAYLTVSE VFPLEMRALA
ISLFYAVGTG VGGFAAPALF GALIDTGSRE NVFMGYLLGA ALVLLAAGVT WRWAVDAERK
SLEEIAPPLG SDGNGDSLNR R
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