| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2081 |
|---|
| Symbol | |
|---|
| ID | 4668723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2282761 |
|---|
| End bp | 2284257 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639823290 |
|---|
| Product | succinate semialdehyde dehydrogenase |
|---|
| Protein accession | YP_970437 |
|---|
| Protein GI | 120610759 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.345453 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT CCTCTTCTTC ACCCATTTCT TCCCTCTCCG CTGCCCGCCC GCTGGTGCGA
AGCCAGCTCT GCATTGCCGG CCGTTGGCAG GCCGCCGCCA GCGGCGCCAC CTTCGCCGTC
ACCGATCCGG CCACGGGCGA GACGATCGCG CGCGTGCCCG ACGGCGGCGC CGAGGACGCG
CGCGCCGCCA CCGATGCCGC CCACGCGGCC TTCGCCACCT GGCGCCACGT GCCGGCCAAG
CAGCGCGCGG CCCTGATCAA GCGCTGGAAC GATCTCGTCC TGGCCCACCA GGAAGGGCTC
GGCGCGCTCA TCTCGCTGGA ACAGGGCAAG CCGCTGGCCG AGGGCAAGGG CGAGGTGGCC
TATGCCGCGA GCTACATCGA GTGGTTCGGC GAAGAGGCCA CGCGCATGAA CGGCGAGGTG
ATTCCCGCGC CCGTGCCGGG CCGGCGCATG TTCGCCCTCA AGGAGCCCGT GGGCGTGGTG
GCCGCGATCA CGCCCTGGAA TTTTCCCGCC GCGATGATCG CGCGCAAGAT CGCCCCCGCG
CTCGCCGCCG GCTGCACGGT GGTCTGCAAG CCCGCGGAAG ACACGCCGCT CACCTCGCTC
GCGCTCGTGG CGCTGGCCGA AGAAGCGGGC ATTCCGCCCG GCGTGCTGAA CATCGTCACC
GCCTCACGCG AGCACACGCC CGCGGTGGTG GATGCGTGGC TCGACGATTC CCGCGTGCGC
AAGATCACCT TCACAGGCTC CACGCCCGTG GGCAAGCACC TGGCGCGGCG CAGTGCCGAT
ACGCTCAAGA AGCTCTCGCT GGAACTCGGC GGCAACGCGC CCTTCATCGT GTTCGAGGAT
GCCGACGTGG ATGCGGCGGT GGACGGCTTC ATGGCCGCGA AGTTCAGGAA CGGCGGGCAG
ACCTGCGTGT GCCCCAACCG CGTGTTCGTG CACCGCGCCG TGCACGACGC ATTCGCCCAG
AAGCTCGCCG CGCGCGTGCA GGCCCTGCAC GTGGGCCCGG CGACGGACCC GGCCTCGCAG
ATCGGCCCGA TGATCAACGC GCGCGCCGTC GAGAAGATCG AACGCCATGT GCAGGATGCC
GTCGCGCGCG GCGCGGCGGT GCTCACCGGC GGCAGGCGCC TGGATGCGCT GGGCGCCCAC
TACTACGCGC CCACCGTGCT CACGGGCGCG GATGCCAGCA TGGCCTGCGC CTGCGAGGAA
ACCTTCGGCC CGGTGGCGCC GCTCACGGTC TTCGACAGCG AAAAGGAAGT GATCGCCGCC
GCCAACGACA CGCCCTTCGG CCTGGCCGCG TACTTCTACA GCAACGACGT GCGCCGCATC
TGGCGCGTGG CCGATGCGCT GGAGAGCGGC ATCGTCGGCA TCAACGAAGG CGCGCTCGCG
GCCGAGGCCG CACCGTTCGG CGGCGTGAAG GAATCCGGCT ACGGCCGCGA GGGCTCCACC
CACGGCCTGG ACGATTACCT GCACACCAAG TACCTTTGCC AGGGCGGGCT CGACTGA
|
|---|
| Protein sequence | MTISSSSPIS SLSAARPLVR SQLCIAGRWQ AAASGATFAV TDPATGETIA RVPDGGAEDA
RAATDAAHAA FATWRHVPAK QRAALIKRWN DLVLAHQEGL GALISLEQGK PLAEGKGEVA
YAASYIEWFG EEATRMNGEV IPAPVPGRRM FALKEPVGVV AAITPWNFPA AMIARKIAPA
LAAGCTVVCK PAEDTPLTSL ALVALAEEAG IPPGVLNIVT ASREHTPAVV DAWLDDSRVR
KITFTGSTPV GKHLARRSAD TLKKLSLELG GNAPFIVFED ADVDAAVDGF MAAKFRNGGQ
TCVCPNRVFV HRAVHDAFAQ KLAARVQALH VGPATDPASQ IGPMINARAV EKIERHVQDA
VARGAAVLTG GRRLDALGAH YYAPTVLTGA DASMACACEE TFGPVAPLTV FDSEKEVIAA
ANDTPFGLAA YFYSNDVRRI WRVADALESG IVGINEGALA AEAAPFGGVK ESGYGREGST
HGLDDYLHTK YLCQGGLD
|
|---|
| |