| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2060 |
|---|
| Symbol | |
|---|
| ID | 4667107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2255437 |
|---|
| End bp | 2256744 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639823269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_970416 |
|---|
| Protein GI | 120610738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.522944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCGA CCATCTGCTC CCCCTTGTTT TCCGTCGCCG CGCTGTGCGC ACTGGCGCCC
CAGGCGCAGG CATTGGAACT CTACAAGGAG GGTGAAAGCC ACCTGAACGC GGAGTTGAAG
GCCGGCTATG GGCTCTTCCA TTCCGGGCGC AACTACATCG GCCGCCCTGG TGGATTCCAG
TGGCAGGAGG GCTTCGCCAA ATACGGCGTG AGCGGCGCCA CCGGCCGGGT CGGCGGCGGC
TCGCTGTACG GGGCCTTCGG CCTTCTCAGC TCCGCCACCT GGGGCGACGG CGATCCGGGG
GGATTCACCA CGGGGCATGA ACGCCGCACC GCGGTGGAAG AGGCGTATGC CGGCTGGAAA
TCGGGGGACC TGTTTCCCGC GCTGGGGGCC GACGGCATCG ACGTTTCCGC TGGCCGCCAG
GTCGTGAAGG CGGGCTCGGG CTTCCTGATC AACGATGACG GCGTCAACCC CGGCCTGGGC
CTGGAAGAAG GCCGCTACGA CCGCGGCGGC GCCTACTATT TCGGCCAGCG CCTGTCATTC
GCCCGCACGG CCGTGCTGCG ACTGGGAGGA AGCGAGGGCC TGCACGGAAG CGCCATGTGG
CTCCGGTCGG ACACGCGGCT GCAGGCCAAC ACCGAACTGG CCGCGGCGAC CCTGGACTAC
ACGGGATCGG CGGGGACGAC CGGCCTGACC CATGTGCATG TGCTGGATGT CGATGAGCGG
TACGCCATCG CTCCCTCGCG GCTGGAGCGC AAGGGCATGA AGGTCTTCAG CCTCCGCGCG
GAGGGTGGTG CCGGCATCGA AGGTGCCGAC TTCGCTGTCG AGTATGCCTA CCAGAAGAAG
CGGTCCCGCA CGGACAGCGC ATGGTATGCC GAGGCCGCGT ACACCTTCTC GCAGATGGCC
TGGAAGCCGT CGCTGAGCTT TCGGCATACA CGCTATTCCA AGGACTTCGA CTCGCTGTTC
CAGGGCGGCT TCCGCGGCCG GTACCAGGGC GAGGTCGCGT CGAACTACGC GTTCTCGTAC
AACTTCAACA CCCGGATCAA CGACGTGGCG CTGACGGTGC GGCCCGGCGA AGCGCTGACC
GCCACGCTCA TGTTCTTCGA CTTCCGGACG TTGGCGGACC GGGCTGTCTC GAACCTCGAC
GCGCAGGAGC TGGCCCTCTA CCTGGACTGG GCCATCACGG ACCACCTCAT GTTCTCCCCG
ATCGTCGGGC TCTACAAGCC CCGGAAGTAC GAGGCGAACG GCGGCAACCA GAACCGGAGC
GCATCGGCGA ATCGCTATTT CAAGCTGATG CTCACGGCGA CGTTCTGA
|
|---|
| Protein sequence | MRSTICSPLF SVAALCALAP QAQALELYKE GESHLNAELK AGYGLFHSGR NYIGRPGGFQ
WQEGFAKYGV SGATGRVGGG SLYGAFGLLS SATWGDGDPG GFTTGHERRT AVEEAYAGWK
SGDLFPALGA DGIDVSAGRQ VVKAGSGFLI NDDGVNPGLG LEEGRYDRGG AYYFGQRLSF
ARTAVLRLGG SEGLHGSAMW LRSDTRLQAN TELAAATLDY TGSAGTTGLT HVHVLDVDER
YAIAPSRLER KGMKVFSLRA EGGAGIEGAD FAVEYAYQKK RSRTDSAWYA EAAYTFSQMA
WKPSLSFRHT RYSKDFDSLF QGGFRGRYQG EVASNYAFSY NFNTRINDVA LTVRPGEALT
ATLMFFDFRT LADRAVSNLD AQELALYLDW AITDHLMFSP IVGLYKPRKY EANGGNQNRS
ASANRYFKLM LTATF
|
|---|
| |