| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2047 |
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| Symbol | |
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| ID | 4667441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2234768 |
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| End bp | 2236486 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639823257 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_970404 |
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| Protein GI | 120610726 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC GCGTCACCAT CCGGACGCCC CTGGGAGAGC AGCTGCAATT CCGGCAGTTG
CGGGGCAGCG AGGAGCTGAG CCAGCTTTTC TCCTTCGACA TCGACCTGCT CTCGGAAGGC
CGCGACATCG ATCCCAAGGC CTTGCTCGGC AAGACGGCGA CGGTGGAGAT CGAGACCGAA
GGCGGCGGCA AGCGCTACCT GGACGGCCTG GTCACGCGCT TCGGCATGCA GGGGCAGGAC
CATCGGCTGT ACTCCTACCA CCTGCGCCTG CAGCCCTGGC TCTGGGTGGC CACGCGGCGG
CAGGATTTCC GCATCTTCCA GTTCAAGACC GTCCCGCAGA TCGTGCAGGA GGTGCTGGGC
CGCTACGGTT ATCCGCTGCA GTTGAAGCTC ACGCGCGCCT ACCGCGCCTG GGACTACTGC
GTGCAATACG GCGAGAGCGA CTTCGACTTC GTCTCCCGGT TGCTGGAGCA CGAGGGTGCG
TATTACTACT TCCAGCACGC GAGCGGCCAG CACACCCTGG TGATCGCGGA CGACATCGTG
GCCGGCCACG AGCCTTTGCC GGGCGCGGCC GTGATCCCGT TCTACCCACC CGAGAAGTCG
GCCGTCGCGG ACCGCGAGAA CATCCACGCC TGGACCCTGG GCGAGGAGAT CAAGTCCGGC
CGCTACTACA ACGACGACTA CGACTTCCGC AAACCGAGGT CGGACCTCTC CAACATGCGC
CAGCAGCCCC CGGGGCATGC GCACGATGCC TACGAGATCT ACGAATGGCC GGGCGGCTAC
GTGCAGCATG GCGATGGTGA GCAGTACGCC CGGGTACGCC TGCAGGAAGG CCTGACGGGC
CACAGCGTCG TCAAAGGCGA ATCGCGCCAC CGCAGCCTCG CGACGGGCTA CACCTTCACG
CTGGAGAACT ACCCGCGGGG CGACCAGAAC CGGCAGTACC TCATCACCGG CGTCACCTAC
CACCTGCACG AGAACCCGAG AAGCTCATCC TTCAACAGCG CCAAGCCGGG TGAATCGCTC
AAGCACAACG AAGAGCAGGG GTCGTTCCAG AAGTTCAGCC TCACGGCCCA GCCCACGAGC
CTGCCCTACA CCCCCGCGAG AACAACCCCG AAGCCACGCA CGACAGGCCC GCAGACCGCC
GTCGTGGTCG GCCCGGCGGG CGAGGAAATC TGGACGGACG AGTACGGCCG CATCAAGGTG
CAGTTCCACT GGGACCGGCT GGGGGCGATG GACGAGAACT CCAGTTGCTG GATGCGGGTG
GCCACGAGCT GGGCGGGCTC GGGGTTCGGA GCGATCTCGA TCCCGCGCAT CGGGCACGAA
GTGGTGGTCG ACTTCCTCAA CGGCGATCCT GACTATCCGC TGGTCGTGGG CTGCGTGTAC
AACGCGGCGA ACATGCCGCC CTGGGCCTTG CCGGGCAATG CCACGCAGTC GGGCATCAAG
ACCAAGTCCA GCAAGGGCGG GGCGTTCGGC GACGGGATGA AGAACGGCGC GGGCGATGCC
AACGCGATCC GCTTCGAGGA CAAGAAGGGC GCAGAGCAAT TATGGCTGCA TGCGCAGAAG
GACCAGCTCA TCGAGGTGGA AAACGACGAG GACCACTGGG TGGGCCAGGA CCGGCGCAAG
ACCATCGACC GGGACGAGAC GAACACCATC CACCGGGACC GGACCGAGAC GGTCGATCGC
AACGAGAAGA TCACGGTGCA TGGCTGGCGC ACCGAGTAA
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| Protein sequence | MTRRVTIRTP LGEQLQFRQL RGSEELSQLF SFDIDLLSEG RDIDPKALLG KTATVEIETE
GGGKRYLDGL VTRFGMQGQD HRLYSYHLRL QPWLWVATRR QDFRIFQFKT VPQIVQEVLG
RYGYPLQLKL TRAYRAWDYC VQYGESDFDF VSRLLEHEGA YYYFQHASGQ HTLVIADDIV
AGHEPLPGAA VIPFYPPEKS AVADRENIHA WTLGEEIKSG RYYNDDYDFR KPRSDLSNMR
QQPPGHAHDA YEIYEWPGGY VQHGDGEQYA RVRLQEGLTG HSVVKGESRH RSLATGYTFT
LENYPRGDQN RQYLITGVTY HLHENPRSSS FNSAKPGESL KHNEEQGSFQ KFSLTAQPTS
LPYTPARTTP KPRTTGPQTA VVVGPAGEEI WTDEYGRIKV QFHWDRLGAM DENSSCWMRV
ATSWAGSGFG AISIPRIGHE VVVDFLNGDP DYPLVVGCVY NAANMPPWAL PGNATQSGIK
TKSSKGGAFG DGMKNGAGDA NAIRFEDKKG AEQLWLHAQK DQLIEVENDE DHWVGQDRRK
TIDRDETNTI HRDRTETVDR NEKITVHGWR TE
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