Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2046 |
Symbol | |
ID | 4667501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2233708 |
End bp | 2234535 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639823256 |
Product | 20S proteasome, A and B subunits |
Protein accession | YP_970403 |
Protein GI | 120610725 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3484] Predicted proteasome-type protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTACT GCGTCGCCAT CAAGCTCAAT GCCGGACTGG TCTTCCTGTC CGATTCCCGC ACCAATGCCG GCCTCGACCA GATCAGTTCC TTCCGCAAGA TGATGATCTA CGAGCGGCCC GGCGACCGCT TCATGGTGCT GCTGTCGGCC GGCAACCTGA GCATTTCGCA ATCGGTGCGG GAGATGCTGC AGACCGAGCA GCTCTTCGAC CGCGACGACA ACGAGCCCAT CACCATCTGG AACGCCAAGA GCATGTTCGA CGCCGCCCGC GTGCTCGGCT CTGCCGTGCG GCACGTGCAC GAACGCGACG GCGCCGCGCT GAAGCGCTCG GGGGTGGATT TCAACGTGTC GCTGGTGTTC GGCGGGCAGA TCCAGGGCGA GGGCATGCGG CTCTTCCAGG TGTATTCGGC CGGCAATTTC ATCGAGGCCA CGCCCGAGAC GCCCTACTTC CAGGTGGGCG AGTCCAAGTA CGGCAAGCCG GTGCTCGACC GCGTGCTCAC GCCCGACACG CCGCTGGACG AGGCCGCCAA GTGCGCGCTG GTGTCCATGG ACAGCACGCT CAAGTCCAAT CTCTCGGTGG GACTGCCGCT GGACCTCGTG GTGTACGAGG CCGGGCGCCT TTCCACCGAC AGGATCGTCT GCATCGACGA GCAGAACCCG TATTTCCGCA TGCTGCGCAG CAGCTGGGGC GAACGCCTGC GCCAGGTGTT CGACAGCATC GAGGACCCGG CCTGGAACGG CGGGGCGACC GACGTGCCGA TCCTGGCGGA GCCCGCGCGC AGCCAGCCGC TGAAGAAGAT CGGCACGCCG AGCGACAAGC TCATCTGA
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Protein sequence | MTYCVAIKLN AGLVFLSDSR TNAGLDQISS FRKMMIYERP GDRFMVLLSA GNLSISQSVR EMLQTEQLFD RDDNEPITIW NAKSMFDAAR VLGSAVRHVH ERDGAALKRS GVDFNVSLVF GGQIQGEGMR LFQVYSAGNF IEATPETPYF QVGESKYGKP VLDRVLTPDT PLDEAAKCAL VSMDSTLKSN LSVGLPLDLV VYEAGRLSTD RIVCIDEQNP YFRMLRSSWG ERLRQVFDSI EDPAWNGGAT DVPILAEPAR SQPLKKIGTP SDKLI
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