| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2041 |
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| Symbol | |
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| ID | 4669331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2227108 |
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| End bp | 2228643 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 639823251 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_970398 |
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| Protein GI | 120610720 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCG ATCCGTCCGC CCCCCGGCCC GCCCCGGCCG CCCGCCCTGC GGCCCGCGCG
CCGTCCGCCC CGCGCATGCT GCGCGCCTGC GCCGCGGCGC TGCTGCCGGC CTGGCTGGCC
GCCTGCTCGG TGGCGCCTGC CTACCAGCCC CCGGCGCTCG CCACCCCCAT GCCCACCGCC
TTCAAGGAAG CGGGCGCGCT CTGGCAGCCG GCCGCGCCCG CCGACGCCGC CGACCGCGGC
GACTGGTGGA CGCTGTTCGG CGACGAGGAA TTGAACCGCC TCGCCGCCCG GGTGCAGGTA
TCGAACCAGA ACATCGCCGC CGCCGTGGCT GCCTATGCCC AGGCCCAGGC GCTGGTGCGC
GAGCAGCGCG CGGGCCTGCT GCCGGGCGTG AGCCTGTCGG CCGGCGAAAC CCGTGCGGGC
GGCGAGACCC GTGCGGGCGG CGAGGGCTCC GCGCGCCGCG GCACCACGGC CCAGGCGGCG
CTGGGCGCGA GCTGGGCGCC GGACGTGTGG GGGCGCCTGG GCAGCGCCGT GGACAGCGCC
CGGGCCAACG CCCAGGCCAG CGAGGCGGAC CTGGCCGCGG CGCGGCTCTC CGCCGTGGGC
TCGCTCGTGG CCGCCTATTT CCAGCTGCGC GAGGCCGACG CCGAGGCCGG GCTGCTGCGC
GACACGGTGC AGGCCTACGA GCGCGCACTG CGCATCGCCC GGAACCGCTA CGACGCCGGC
GTGGCCGCGC AATCGGACGT ACTGCAGGCG CGCACCCAGC TGGCCAACGC CCGCGCCGAT
CTCGCCACCG CGCAGCGCAA CCGCGCCGGC TACGAGCACG CCATCGCGGT GCTGGCGGGC
CAGCCGCCGG CGGCGTTCAG CCTGCCTGCC GGCACCTGGG TGGCACGCGT TCCCGAGGTG
CCCGCGGGGC TGCCCTCGAC CCTGCTGGAG CGCCGCCCGG ACATCGCCGC GGCCGAGCGC
GCCGTGGCCG CCGCCAACGC GCAGATCGGC GTGCAGCGTT CCGCCTACTA CCCCAGCTTC
AGCCTCACGG CCTCCCTGGG GCGCAGCGGC ACCGGCCTGG GCGACCTGTT CAGCGCCTCG
GGCGCGCTGT GGTCGCTGGG CCTGTCGGCC GCCCAGACGG TGTTCGACGG CGGCGCCATC
GCCGCGCGCG TGGAGCAGGC GCGCGCGGCC CGCGACGCGC GCGTGGCCAA CTACCGCCAG
ACGGTGCTGG GCGCCTTCCA GGCGGTGGAA GACCAGCTCA CGGCGGTGCG CACCCTGCAG
GCGCAGGAGC CCCTGCGGCA GGAGGCCGTC TCGGCCGCCC AGCGCGCGGA GGAGCAGATG
CTCAACCGCT ACCGTGCCGG CCAGGTGGGC TACACCGACG TGGTCACCGC CCAGGTGGCG
GCGCTGTCCG CGCGGCGCGC GCTGCTGCAG CTGCAGGTGA ACCGCCAGCT CGCGGTGGCA
TCGCTCGTCC AGGCGCTGGG CGGCGGCTGG CAGGCCCCCT GGATGGACGG CGCCGCCGCG
GCCACGGCCG GGCAGGGTGC TGCCGAGCCC CGATAA
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| Protein sequence | MTFDPSAPRP APAARPAARA PSAPRMLRAC AAALLPAWLA ACSVAPAYQP PALATPMPTA
FKEAGALWQP AAPADAADRG DWWTLFGDEE LNRLAARVQV SNQNIAAAVA AYAQAQALVR
EQRAGLLPGV SLSAGETRAG GETRAGGEGS ARRGTTAQAA LGASWAPDVW GRLGSAVDSA
RANAQASEAD LAAARLSAVG SLVAAYFQLR EADAEAGLLR DTVQAYERAL RIARNRYDAG
VAAQSDVLQA RTQLANARAD LATAQRNRAG YEHAIAVLAG QPPAAFSLPA GTWVARVPEV
PAGLPSTLLE RRPDIAAAER AVAAANAQIG VQRSAYYPSF SLTASLGRSG TGLGDLFSAS
GALWSLGLSA AQTVFDGGAI AARVEQARAA RDARVANYRQ TVLGAFQAVE DQLTAVRTLQ
AQEPLRQEAV SAAQRAEEQM LNRYRAGQVG YTDVVTAQVA ALSARRALLQ LQVNRQLAVA
SLVQALGGGW QAPWMDGAAA ATAGQGAAEP R
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