Gene Aave_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2039 
Symbol 
ID4667810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2220342 
End bp2223902 
Gene Length3561 bp 
Protein Length1186 aa 
Translation table11 
GC content72% 
IMG OID639823249 
Productacriflavin resistance protein 
Protein accessionYP_970396 
Protein GI120610718 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00865323 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGT CGCGTCCCTT TATCGAGCGG CCCGTCGCCA CAGCGCTCCT CATGCTGGCC 
ATCGTGCTGG CGGGGCTGGT GGGGTTCCGC TTCCTGCCCC TGTCGGCCCT GCCGCAGGTG
GACTACCCGA CCATCCAGGT GCAGACGCTC TATCCCGGCG CCAGCCCGGA GGTCATGAGC
CGCAACGTCA CCGCGCCCCT GGAGCGGCAG TTCGGGCAGA TGCCGGGCCT GGCCCGCATG
GCCTCCACCA GCGCGGCGGG CGTGTCCATC GTCACGCTGC AGTTCGACCT GGGCCTGGCC
ATCGACATCG CCGAGCAGGA GGTGCAGGCG GCCATCAATG CCGGCTCCTC GCTCCTGCCC
ACGGACCTGC CCGCGCCGCC GGTCTATGCC AAGGTGAACC CGGCCGACGC GCCGGTGCTC
ACGATGGCGA TCAGTTCCGA CACGCTGCCG CTCACCGAAG TGCAGAACCT CGTGAACACG
CGGCTGGCGC AGAAGATCAG CCAGGTGCCC GGCGTCGGCC TGGTGACCCT GGCCGGGGGG
CAGCGGCCGG CCGTGCGCAT CCAGGCCGAC ACCAAGGCGC TGGCCTCCTA CGGCATCGGG
CTGGACACGC TGCGCAGCGC CATCTCGGCG GCCAACGCCA ACAGCGCCAA GGGGAGCTTC
GACGGGCCGC AGCGCGCCTA CACCATCAAC GCCAACGACC AGCTGCTCAC GGTGGACGAC
TACAAGCGGC TCATCGTGTC CTGGAAAAAC GGCGCGCCGG TCCGCATGAT CGATGTCGCC
CGCGTGGTGA ACGGGGCCGA GAACGACCGG CTGCGCGCCT GGGCCGGCGT CCGCGCCGCG
CCGGGCCGCC CCAAGCAAGC GGAGGCCCCC CCGGGGGGCA GCGAACCAGG CGAAGCCGGG
AGCGTGGGGG CCACCGAGCC GCCGCCGGGC CGCCCCAAGG CGGCGAGCGC ACCCCCGGGG
GGCAGCGAAC CAGGCGAAGC CGGGAGCGTG GGGGCCGCCG AGCCGCCGCC GGGCCGCCCC
AAGGCGGCGA GCGCCCCCCC GGGGGGCAGC GAACCAGGCG AAGCCGGGAG CGTGGGGGCC
ACCGAGCCGC CGCCGGGCCG CCCCAAGGCG GCGAGCGCCC CCCCGGGGGG CAGCGAACCA
GGCGAAGCCG GGAGCGTGGG GGCCACCGAG CCGCCGCCGG GCCGCCCCAA GGCGGCGAGC
GCCCCCCCGG GGGGCAGCGA ACCAGGCGAA GCCGGGAGCG TGGGGGCCAC ATTGACGCCA
GCCATCATCC TGAACGTGCA GCGCCAGCCG GGCGCCAACG TGATCTCCAC GGTGGACAGC
ATCCGGCGCC AGCTGCCCGA GCTGCAGGCC GGGCTGCCCG CGGGCCTGGA CGTGCAGGTG
CTCTCGGACC GCACCACGGG CATCCGGGCA TCCGTCCACC ACGTCGAGAT GGAGCTGGTG
CTCGCCGTGC TGATGGTGGT GCTGGTGATC TTCTTCTTCC TGCACAGCCT GCGTGCCACG
GTGATCGCCA GCCTGGCCGT GCCGATCTCG CTCATCGGCA CCTGCGGCGT GATGTACCTG
CTGGGCTACA GCCTGAACAA CCTCAGCCTG ATGGCGCTCA CCATCGCCAC CGGCTTCGTG
GTGGACGACG CCATCGTGAT GATCGAGAAC ATCGCCCGCT ACATCGAGGA GGGCGAGCCC
CCGTTCCAGG CCGCGCTCAA GGGCGCCACG CAGATCGGCT TCACCATCAT CTCGCTCACC
GTGTCGCTGA TCGCGGTGCT GATCCCGCTG CTGTTCATGA GCGACGTGGT GGGGCGCCTG
TTCCGCGAGT TCGCGGTGAC GCTGGCGCTC ACCATCCTGA TCTCGGCGGT GGTCTCGCTC
ACCCTGGTGC CGATGATGTC CGCGCGCTGG CTGCGGGCGC TGCCCGACAC ACCGCCGCGC
GGGCTGGGCG GTGCCATCCA GCGCGGCTTC GACCGCGTGA TCGCGCGCTA CGACGTCTGG
CTGCAGTGGG TCCTGCGCCG CGAGGGCGCC ACGCTCGCCG TGGCCCTGCT GACGCTCGCG
CTCACCGTGG TGCTGTATGT CTTCATTCCC AAGGGGCTGT TTCCCACGCA GGACACGGGC
CAGCTGCAGG GCCGCCTGGT GGCGGCGCAG GATGTCTCGT TCGAGCGCAT GAGCGGATTG
CAGCAGGAAG CCGTGCGCGC CCTCCTGCAG GACCCCGACG TGGCCTCGAT CAGTTCGTTC
GTGGGCGTGG ACGGCGCCAA CAACGCGATG CTGAACACCG GGCGCCTGCT CATCAACCTC
CGGGAGGGCC GCGACCGCCA GGAGGCCGTG ATGCAGCGGC TGCGCGAGCG GGCGGACGCC
GTGGCGGGCG TCACGCTGTA CCTGCAGCCC ACGCAGGATC TGACCATCGA CGCGGAAACC
GGCCCCACCG AATACCGCGC CACCATCGGC GGCGTCGATT CCACCGAAGT GAACGCCTGG
ACGAACAGGC TGGTGGAGCG GCTGCGCACG GTGCCGCAGG TGCGCAACGC CACCACCGAC
GCGGGTGCGC AGGGTCTCTC GGCCTTCGTG GACATCGACC GGGCCACGGC CGCGCGCCTC
TCGGTCACCG CCAGCGCGGT GGACGATACC CTCTACAGTG CCTTCGGCCA GCGCATCGTT
TCCACCATCT TCACCGAGAC CAACCAGTAC CGCGTCATCC TGGAGGCGCA GCAGGAGGGC
CTGTCGAGCC CCGAGGCGCT GGGCACGCTG CCGTTGCGCA CGGGCAGCGG GGCACCCACG
CCGCTGTCGG CGGTCGCCAC CGTGCGCGAG CAGCCCGCGC CGCTGCAGAT CACGCGCGTG
GCGCAGTACC CGGCCGCCAC GCTGGGCTTC GACAAGGCCG ACGGCGTCTC CCTGGGCGAG
GCGGTCGATG CGATCCGCGC CGCGGCGCAG GAGATCGGCA TGCCCGCGGG CCTGTCGCTG
CAGTTCCAGG GCGCGGCCGG CGCCTACGAG AAGTCGCTCG CCAGCCAGCT CTGGCTGATC
CTCGCCGCGA TGGTCTGCGT CTACATCGTG CTGGGCGTGC TCTACGAGAG CTACGTGCAT
CCGCTCACCA TCCTCTCGAC CCTGCCATCG GCCGGAGTGG GCGCGCTGCT GGCGCTGATG
CTCACCGGCA ATGACCTCGG GGTGATCGGC ATCATCGGCA TCATCCTGCT GATCGGCATC
GTCAAGAAGA ACGCGATCAT GATGATCGAC TTCGCCATCG ACGCCGAGCG CGGCCAGGGG
CTGCCGCCGC GCGTGGCCAT CCACCAGGCC GCGCTGCTGC GCTTCCGGCC CATCCTGATG
ACCACGCTGG CCGCGCTCTT CGCCGCGCTG CCGCTGATGC TGGGCTGGGG CGAGGGCGCC
GAGCTGCGCC GCCCGCTGGG CCTGGCGATC TTCGGCGGCC TGGTACTGAG CCAGTTGCTC
ACGCTCTTCA CCACGCCGGT GATCTACCTC GCCTTCGACC GGCTGGGGCG CCGCTGGACG
GGCCGGGGCA CGGCCGCGGC GCCCGAGGTG CCCACCGCAC TGGCGCCGCC GGCCGCGCCG
GCCGGGGAGG GCCGCCCGTG A
 
Protein sequence
MSPSRPFIER PVATALLMLA IVLAGLVGFR FLPLSALPQV DYPTIQVQTL YPGASPEVMS 
RNVTAPLERQ FGQMPGLARM ASTSAAGVSI VTLQFDLGLA IDIAEQEVQA AINAGSSLLP
TDLPAPPVYA KVNPADAPVL TMAISSDTLP LTEVQNLVNT RLAQKISQVP GVGLVTLAGG
QRPAVRIQAD TKALASYGIG LDTLRSAISA ANANSAKGSF DGPQRAYTIN ANDQLLTVDD
YKRLIVSWKN GAPVRMIDVA RVVNGAENDR LRAWAGVRAA PGRPKQAEAP PGGSEPGEAG
SVGATEPPPG RPKAASAPPG GSEPGEAGSV GAAEPPPGRP KAASAPPGGS EPGEAGSVGA
TEPPPGRPKA ASAPPGGSEP GEAGSVGATE PPPGRPKAAS APPGGSEPGE AGSVGATLTP
AIILNVQRQP GANVISTVDS IRRQLPELQA GLPAGLDVQV LSDRTTGIRA SVHHVEMELV
LAVLMVVLVI FFFLHSLRAT VIASLAVPIS LIGTCGVMYL LGYSLNNLSL MALTIATGFV
VDDAIVMIEN IARYIEEGEP PFQAALKGAT QIGFTIISLT VSLIAVLIPL LFMSDVVGRL
FREFAVTLAL TILISAVVSL TLVPMMSARW LRALPDTPPR GLGGAIQRGF DRVIARYDVW
LQWVLRREGA TLAVALLTLA LTVVLYVFIP KGLFPTQDTG QLQGRLVAAQ DVSFERMSGL
QQEAVRALLQ DPDVASISSF VGVDGANNAM LNTGRLLINL REGRDRQEAV MQRLRERADA
VAGVTLYLQP TQDLTIDAET GPTEYRATIG GVDSTEVNAW TNRLVERLRT VPQVRNATTD
AGAQGLSAFV DIDRATAARL SVTASAVDDT LYSAFGQRIV STIFTETNQY RVILEAQQEG
LSSPEALGTL PLRTGSGAPT PLSAVATVRE QPAPLQITRV AQYPAATLGF DKADGVSLGE
AVDAIRAAAQ EIGMPAGLSL QFQGAAGAYE KSLASQLWLI LAAMVCVYIV LGVLYESYVH
PLTILSTLPS AGVGALLALM LTGNDLGVIG IIGIILLIGI VKKNAIMMID FAIDAERGQG
LPPRVAIHQA ALLRFRPILM TTLAALFAAL PLMLGWGEGA ELRRPLGLAI FGGLVLSQLL
TLFTTPVIYL AFDRLGRRWT GRGTAAAPEV PTALAPPAAP AGEGRP