Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2039 |
Symbol | |
ID | 4667810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2220342 |
End bp | 2223902 |
Gene Length | 3561 bp |
Protein Length | 1186 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639823249 |
Product | acriflavin resistance protein |
Protein accession | YP_970396 |
Protein GI | 120610718 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00865323 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGT CGCGTCCCTT TATCGAGCGG CCCGTCGCCA CAGCGCTCCT CATGCTGGCC ATCGTGCTGG CGGGGCTGGT GGGGTTCCGC TTCCTGCCCC TGTCGGCCCT GCCGCAGGTG GACTACCCGA CCATCCAGGT GCAGACGCTC TATCCCGGCG CCAGCCCGGA GGTCATGAGC CGCAACGTCA CCGCGCCCCT GGAGCGGCAG TTCGGGCAGA TGCCGGGCCT GGCCCGCATG GCCTCCACCA GCGCGGCGGG CGTGTCCATC GTCACGCTGC AGTTCGACCT GGGCCTGGCC ATCGACATCG CCGAGCAGGA GGTGCAGGCG GCCATCAATG CCGGCTCCTC GCTCCTGCCC ACGGACCTGC CCGCGCCGCC GGTCTATGCC AAGGTGAACC CGGCCGACGC GCCGGTGCTC ACGATGGCGA TCAGTTCCGA CACGCTGCCG CTCACCGAAG TGCAGAACCT CGTGAACACG CGGCTGGCGC AGAAGATCAG CCAGGTGCCC GGCGTCGGCC TGGTGACCCT GGCCGGGGGG CAGCGGCCGG CCGTGCGCAT CCAGGCCGAC ACCAAGGCGC TGGCCTCCTA CGGCATCGGG CTGGACACGC TGCGCAGCGC CATCTCGGCG GCCAACGCCA ACAGCGCCAA GGGGAGCTTC GACGGGCCGC AGCGCGCCTA CACCATCAAC GCCAACGACC AGCTGCTCAC GGTGGACGAC TACAAGCGGC TCATCGTGTC CTGGAAAAAC GGCGCGCCGG TCCGCATGAT CGATGTCGCC CGCGTGGTGA ACGGGGCCGA GAACGACCGG CTGCGCGCCT GGGCCGGCGT CCGCGCCGCG CCGGGCCGCC CCAAGCAAGC GGAGGCCCCC CCGGGGGGCA GCGAACCAGG CGAAGCCGGG AGCGTGGGGG CCACCGAGCC GCCGCCGGGC CGCCCCAAGG CGGCGAGCGC ACCCCCGGGG GGCAGCGAAC CAGGCGAAGC CGGGAGCGTG GGGGCCGCCG AGCCGCCGCC GGGCCGCCCC AAGGCGGCGA GCGCCCCCCC GGGGGGCAGC GAACCAGGCG AAGCCGGGAG CGTGGGGGCC ACCGAGCCGC CGCCGGGCCG CCCCAAGGCG GCGAGCGCCC CCCCGGGGGG CAGCGAACCA GGCGAAGCCG GGAGCGTGGG GGCCACCGAG CCGCCGCCGG GCCGCCCCAA GGCGGCGAGC GCCCCCCCGG GGGGCAGCGA ACCAGGCGAA GCCGGGAGCG TGGGGGCCAC ATTGACGCCA GCCATCATCC TGAACGTGCA GCGCCAGCCG GGCGCCAACG TGATCTCCAC GGTGGACAGC ATCCGGCGCC AGCTGCCCGA GCTGCAGGCC GGGCTGCCCG CGGGCCTGGA CGTGCAGGTG CTCTCGGACC GCACCACGGG CATCCGGGCA TCCGTCCACC ACGTCGAGAT GGAGCTGGTG CTCGCCGTGC TGATGGTGGT GCTGGTGATC TTCTTCTTCC TGCACAGCCT GCGTGCCACG GTGATCGCCA GCCTGGCCGT GCCGATCTCG CTCATCGGCA CCTGCGGCGT GATGTACCTG CTGGGCTACA GCCTGAACAA CCTCAGCCTG ATGGCGCTCA CCATCGCCAC CGGCTTCGTG GTGGACGACG CCATCGTGAT GATCGAGAAC ATCGCCCGCT ACATCGAGGA GGGCGAGCCC CCGTTCCAGG CCGCGCTCAA GGGCGCCACG CAGATCGGCT TCACCATCAT CTCGCTCACC GTGTCGCTGA TCGCGGTGCT GATCCCGCTG CTGTTCATGA GCGACGTGGT GGGGCGCCTG TTCCGCGAGT TCGCGGTGAC GCTGGCGCTC ACCATCCTGA TCTCGGCGGT GGTCTCGCTC ACCCTGGTGC CGATGATGTC CGCGCGCTGG CTGCGGGCGC TGCCCGACAC ACCGCCGCGC GGGCTGGGCG GTGCCATCCA GCGCGGCTTC GACCGCGTGA TCGCGCGCTA CGACGTCTGG CTGCAGTGGG TCCTGCGCCG CGAGGGCGCC ACGCTCGCCG TGGCCCTGCT GACGCTCGCG CTCACCGTGG TGCTGTATGT CTTCATTCCC AAGGGGCTGT TTCCCACGCA GGACACGGGC CAGCTGCAGG GCCGCCTGGT GGCGGCGCAG GATGTCTCGT TCGAGCGCAT GAGCGGATTG CAGCAGGAAG CCGTGCGCGC CCTCCTGCAG GACCCCGACG TGGCCTCGAT CAGTTCGTTC GTGGGCGTGG ACGGCGCCAA CAACGCGATG CTGAACACCG GGCGCCTGCT CATCAACCTC CGGGAGGGCC GCGACCGCCA GGAGGCCGTG ATGCAGCGGC TGCGCGAGCG GGCGGACGCC GTGGCGGGCG TCACGCTGTA CCTGCAGCCC ACGCAGGATC TGACCATCGA CGCGGAAACC GGCCCCACCG AATACCGCGC CACCATCGGC GGCGTCGATT CCACCGAAGT GAACGCCTGG ACGAACAGGC TGGTGGAGCG GCTGCGCACG GTGCCGCAGG TGCGCAACGC CACCACCGAC GCGGGTGCGC AGGGTCTCTC GGCCTTCGTG GACATCGACC GGGCCACGGC CGCGCGCCTC TCGGTCACCG CCAGCGCGGT GGACGATACC CTCTACAGTG CCTTCGGCCA GCGCATCGTT TCCACCATCT TCACCGAGAC CAACCAGTAC CGCGTCATCC TGGAGGCGCA GCAGGAGGGC CTGTCGAGCC CCGAGGCGCT GGGCACGCTG CCGTTGCGCA CGGGCAGCGG GGCACCCACG CCGCTGTCGG CGGTCGCCAC CGTGCGCGAG CAGCCCGCGC CGCTGCAGAT CACGCGCGTG GCGCAGTACC CGGCCGCCAC GCTGGGCTTC GACAAGGCCG ACGGCGTCTC CCTGGGCGAG GCGGTCGATG CGATCCGCGC CGCGGCGCAG GAGATCGGCA TGCCCGCGGG CCTGTCGCTG CAGTTCCAGG GCGCGGCCGG CGCCTACGAG AAGTCGCTCG CCAGCCAGCT CTGGCTGATC CTCGCCGCGA TGGTCTGCGT CTACATCGTG CTGGGCGTGC TCTACGAGAG CTACGTGCAT CCGCTCACCA TCCTCTCGAC CCTGCCATCG GCCGGAGTGG GCGCGCTGCT GGCGCTGATG CTCACCGGCA ATGACCTCGG GGTGATCGGC ATCATCGGCA TCATCCTGCT GATCGGCATC GTCAAGAAGA ACGCGATCAT GATGATCGAC TTCGCCATCG ACGCCGAGCG CGGCCAGGGG CTGCCGCCGC GCGTGGCCAT CCACCAGGCC GCGCTGCTGC GCTTCCGGCC CATCCTGATG ACCACGCTGG CCGCGCTCTT CGCCGCGCTG CCGCTGATGC TGGGCTGGGG CGAGGGCGCC GAGCTGCGCC GCCCGCTGGG CCTGGCGATC TTCGGCGGCC TGGTACTGAG CCAGTTGCTC ACGCTCTTCA CCACGCCGGT GATCTACCTC GCCTTCGACC GGCTGGGGCG CCGCTGGACG GGCCGGGGCA CGGCCGCGGC GCCCGAGGTG CCCACCGCAC TGGCGCCGCC GGCCGCGCCG GCCGGGGAGG GCCGCCCGTG A
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Protein sequence | MSPSRPFIER PVATALLMLA IVLAGLVGFR FLPLSALPQV DYPTIQVQTL YPGASPEVMS RNVTAPLERQ FGQMPGLARM ASTSAAGVSI VTLQFDLGLA IDIAEQEVQA AINAGSSLLP TDLPAPPVYA KVNPADAPVL TMAISSDTLP LTEVQNLVNT RLAQKISQVP GVGLVTLAGG QRPAVRIQAD TKALASYGIG LDTLRSAISA ANANSAKGSF DGPQRAYTIN ANDQLLTVDD YKRLIVSWKN GAPVRMIDVA RVVNGAENDR LRAWAGVRAA PGRPKQAEAP PGGSEPGEAG SVGATEPPPG RPKAASAPPG GSEPGEAGSV GAAEPPPGRP KAASAPPGGS EPGEAGSVGA TEPPPGRPKA ASAPPGGSEP GEAGSVGATE PPPGRPKAAS APPGGSEPGE AGSVGATLTP AIILNVQRQP GANVISTVDS IRRQLPELQA GLPAGLDVQV LSDRTTGIRA SVHHVEMELV LAVLMVVLVI FFFLHSLRAT VIASLAVPIS LIGTCGVMYL LGYSLNNLSL MALTIATGFV VDDAIVMIEN IARYIEEGEP PFQAALKGAT QIGFTIISLT VSLIAVLIPL LFMSDVVGRL FREFAVTLAL TILISAVVSL TLVPMMSARW LRALPDTPPR GLGGAIQRGF DRVIARYDVW LQWVLRREGA TLAVALLTLA LTVVLYVFIP KGLFPTQDTG QLQGRLVAAQ DVSFERMSGL QQEAVRALLQ DPDVASISSF VGVDGANNAM LNTGRLLINL REGRDRQEAV MQRLRERADA VAGVTLYLQP TQDLTIDAET GPTEYRATIG GVDSTEVNAW TNRLVERLRT VPQVRNATTD AGAQGLSAFV DIDRATAARL SVTASAVDDT LYSAFGQRIV STIFTETNQY RVILEAQQEG LSSPEALGTL PLRTGSGAPT PLSAVATVRE QPAPLQITRV AQYPAATLGF DKADGVSLGE AVDAIRAAAQ EIGMPAGLSL QFQGAAGAYE KSLASQLWLI LAAMVCVYIV LGVLYESYVH PLTILSTLPS AGVGALLALM LTGNDLGVIG IIGIILLIGI VKKNAIMMID FAIDAERGQG LPPRVAIHQA ALLRFRPILM TTLAALFAAL PLMLGWGEGA ELRRPLGLAI FGGLVLSQLL TLFTTPVIYL AFDRLGRRWT GRGTAAAPEV PTALAPPAAP AGEGRP
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