| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2038 |
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| Symbol | |
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| ID | 4667209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2218872 |
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| End bp | 2220320 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639823248 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_970395 |
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| Protein GI | 120610717 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0373239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCCA CCGATCCCCA CGCCGCTCCT TCCGCTGACT CCGCGCCCGG CCCCGGCGCA
GCGGGCCGGC CGCCGGGGCG GCGCGCGCGC TGGCTGGGCA CCGGGGTGGC ACTGCTGGCC
GTGGCGCTGC TGTGCGGCGG CGCATGGTGG CTGGTGCAGC GCTCCAAGGC GCCGGTCGCC
GGCCCGGGTT TTCCCGCCGC GGGCGGGCCG GGAGGGCCCG CCCGGCCGGC CGGCGCCGGG
CCCGCCGGTG GCCGCGCGCT GGTCACCGTG GGCGAGGCGA CGGCCCGCCG GCTGCGCATG
CCGGTGGCCA TCGAGGCCCT GGGCACCGTG ATACCGGTCA CCACCGTCAC GCTCCGGCCC
CAGGTGGCGG GCGTGCTCAC CGAGGTGCTG TTCACCGAAG GGCAGATGGT GCGCAAGGGC
CAGGTGCTCG CGCAGATCGA CCCGCGGCCC TACGAGCAGG CGCTGATGCA GGCCGAGGGC
ACGCTGCGGC GCGACGAGGC GCAGCTGGAG AACGCGCGCA TCACCCTCGA GCGCTACCGC
ACCCTGCTGT CGCAGGACTC CATCGCCCGG CAGGACGTGG ATACGCAGGC CGCGCTGGTC
AAGCAGCTGG AAGGCACCGT GATGACGGAC CGGGCGCAGG AGCGCAGCGC CCGGCTCAAC
CTCGGCTACA CGCGCGTGAC GGCGCCGGCC GCGGGCCGCA TCGGCCTGCG TTCCGTGGAT
GCGGGCAATT ACGTGACCAC CGGAGATACC TCGGGCCTGG CCACCATCAC CCAGACCACG
CCGATCGACG TGCAGTTCTC CATCCCGCAG GACCGCCTGG CCGACGTGCA GGCCGCCGCC
GCCGAGGCCG GCGCCGCCGG GCTGCCGGTG GTGGCCAAGG ACCGCACCCG CACCACGGAC
CTCGCCCAGG GGCGGTTCTC CACCCTGGAC AACCTGGTGG ACACCGCCAC CGGCACGGTC
CGGGCCAAGG CGCGCTTCGC CAATGCCGAC GGCCGGCTCT TCCCCAACCA GTTCGTGAAC
GTGCGTCTGG AGCTGCGCGA GGTGGAGGCC CTGGTGGTGC CCGTGACCGC GGTGCGGACC
GGGGCGAACG GCGACTTCGT GTACGTGATC AACGACGACC GCACGGTGAC GCTGCGCAGG
GTGCGGCGCG GCCAGTCCAC GGTGGAGTGG GTGGCGATCG CGGAAGGGCT GAAGCCCGGC
GAGCGCGTGG TGACCGAAGG CGGCGACCGC CTGCGCGACG GCGCGCGCGT GCAGTTGCCG
GAACCCGGCG GGCCGGGAGC GGCGCAGGGC GCGCCCGGGC GGCGCGGGCG GGCTTCCGGG
GCTTCCTGGC CGGCGGGCGC GGAGCACGGC GGCTCCGACG GCGCACCGCA CCGCCAACGG
CACCGGCCGG ATGCCGGGGA GGCGGCGCCG GCCGCGCCGG CGGCGTCGGT GCCGGCCAGC
CGTTCCTGA
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| Protein sequence | MRSTDPHAAP SADSAPGPGA AGRPPGRRAR WLGTGVALLA VALLCGGAWW LVQRSKAPVA
GPGFPAAGGP GGPARPAGAG PAGGRALVTV GEATARRLRM PVAIEALGTV IPVTTVTLRP
QVAGVLTEVL FTEGQMVRKG QVLAQIDPRP YEQALMQAEG TLRRDEAQLE NARITLERYR
TLLSQDSIAR QDVDTQAALV KQLEGTVMTD RAQERSARLN LGYTRVTAPA AGRIGLRSVD
AGNYVTTGDT SGLATITQTT PIDVQFSIPQ DRLADVQAAA AEAGAAGLPV VAKDRTRTTD
LAQGRFSTLD NLVDTATGTV RAKARFANAD GRLFPNQFVN VRLELREVEA LVVPVTAVRT
GANGDFVYVI NDDRTVTLRR VRRGQSTVEW VAIAEGLKPG ERVVTEGGDR LRDGARVQLP
EPGGPGAAQG APGRRGRASG ASWPAGAEHG GSDGAPHRQR HRPDAGEAAP AAPAASVPAS
RS
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