| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2023 |
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| Symbol | |
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| ID | 4667360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2202765 |
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| End bp | 2204888 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639823234 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_970381 |
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| Protein GI | 120610703 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.685343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTCCC CCGCGCCCGC CGGCGCGGGG CGCCGCCTGC CCCCGCCCGC CGCCACCGCC
CAGGCCGTGC CGCGCGCCGC GCCGCCGCTT CCGGCAGACG GGCGCGCGCG CGCGGTGATC
GACGCGGTGC TGCCGGTGGT GGACGGCGGC CGCTTCCCGG TCAAGCGCGT GGCGGGCGAG
GCGGTGCGCA TCACCGCCCA CTGCTTCACC GACGGGCACG ACGTGCCGCG GGCGATGCTG
CAGTGGTGGA AGGAAGAAGG CCCCGGCGCC CCCACCGCGC CGGCCGAGGT GCCGATGCAC
CCCGAGGTGA ACGATGAATG GTGGGCCGAG TTCACGCCGC CCGACCCGGG GCTCTACCGC
TACACGGTGG TCGCCTGGGT GGACGCCTTC GAATCCTGGC GGCACGACAT GCAGCGCCGC
GTGGATCCGG CGGACATCCG CGTGGCGGCG CGCGTGGGCG CGGCCGACGC CCGGGCCGCA
GCGATGCGGG CCGCGGCGCA TCCCGCGCCG GCCGACGCGC GGCAGCTCGA GGAATGGGCG
GAGGCGCTGG AACGCGGCGC CCGCGAGGAC AGCACCGATG CGGCGCCGCT CAAGGCGCTG
GCGCTGCAGG AAGCCGCGGC CGAGGCGATG CGCCGCCACC CCGACCGCAG CCTGGAAACC
CGCCACCCCG TCGCGCTGCC GCTGCGGGCG GACCGGGAGC GCGCGCGCTT CAGCACCTGG
TACGAACTCT TCCCGCGCTC CACCGCGGCC GTGCCGGGCA TGCACGGCAC CTTCCGCGAC
GTGGAGGGCC GGCTGGCCGA CATCGCCGCC ATGGGCTTCG ACGTGCTCTA TTTCCCGCCC
GTCCACCCCA TCGGCCGGGT GCAGCGCAAG GGCCGCAACA ACGCCCTCGC GGCCGCGCCC
GGCGACGTGG GCAGCCCCTG GGCGATCGGC GCCGACGAAG GCGGGCACAA GTCCATCCAC
CCGGAACTGG GCACCCCCGA AGACTTCCGG CGCCTTGTCG CGCGGGCCCG GGAACACGGC
ATCGAGATCG CGCTGGACAT CGCCTTCCAG TGCGCGCCGG ACCATCCCTA CGTTCGCGAG
CATCCTGACT GGTTCCGCTG GCGCCCCGAC GGCACCGTGC AGTACGCGGA GAACCCGCCC
AAGAAGTACC AGGACATCTA TCCCTTCCAC TTCGAGTGCG AGGACTGGCG GGGCCTCTGG
CAGGAACTGC GCAGCGTGTT CGCGCACTGG ATCGGCGAGG GGGTGCGCAT CTTTCGCGTG
GACAACCCGC ACACCAAGGC ATTCGGCTTC TGGGAATGGG TGATCGGCGA CATCCAGCGC
GAGCACCCCG ACGTGATCTT CCTGGCGGAG GCCTTCACGC GCCCCAAGGT GATGCACGGC
CTGGCGAAGC GGGGTTATAC CCAGTCCTAT ACCTACTTCA CCTGGCGCAA CACGCGGCAG
GAACTGCAGG ACTATTTCAC CGAGCTCAAC ACCGCGCCCG GGCGGGACTA CTTCCGCCCC
AACGCGTGGC CCAACACGCC CGACATCCTG CATGCGCAAC TGCAGGGCGG CGAGCCCGCC
ATGTTCGCGC TGCGGCTGGT GCTGGCCGCC ACGCTCTCGG CCAACTACGG CATCTACGGT
CCGGCCTACG AACTGCTGGA GCACGTGCCC CGCGAGCCCG GCAGCGAGGA GTACCGCGAC
TCCGAAAAGT ACCAGCTGCG GCACTGGGAC CTGGAGCGGC CCGGCAACCT GCGGCCGCTC
ATCGCCCGCG TGAACCACAT CCGTCGCGCC CACCCTGCCC TGCAGGCCGA CCACAGCCTG
CGCTTCCTGC CGGTGGACAA CGAGATGCTG CTGGCCTACC TGAAGCGATC GCCGGACGGC
CGCGACGTGA TCGTGACGGT GGTCAACCTC GATCCGCACC ACGCGCAGTC GGGCTGGATG
CGCCTGACCC CGGCCGACAT CGCCATCGCG GCGGGCGACC CGCCCGCGGC CGACTGGCAG
ATGCACGACC TGCTGAGCCA GCAGCGCTTC CTCTGGCAGG GCGACACCCA CTACGTGCTG
CTGGACCCGC AGCGCGCGCC CGCCCACATC TTCGCCGTGC GGCGCCGCGT CGCGGGCGCC
GGAGACATCG ACCCCTTCCA GTGA
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| Protein sequence | MPSPAPAGAG RRLPPPAATA QAVPRAAPPL PADGRARAVI DAVLPVVDGG RFPVKRVAGE
AVRITAHCFT DGHDVPRAML QWWKEEGPGA PTAPAEVPMH PEVNDEWWAE FTPPDPGLYR
YTVVAWVDAF ESWRHDMQRR VDPADIRVAA RVGAADARAA AMRAAAHPAP ADARQLEEWA
EALERGARED STDAAPLKAL ALQEAAAEAM RRHPDRSLET RHPVALPLRA DRERARFSTW
YELFPRSTAA VPGMHGTFRD VEGRLADIAA MGFDVLYFPP VHPIGRVQRK GRNNALAAAP
GDVGSPWAIG ADEGGHKSIH PELGTPEDFR RLVARAREHG IEIALDIAFQ CAPDHPYVRE
HPDWFRWRPD GTVQYAENPP KKYQDIYPFH FECEDWRGLW QELRSVFAHW IGEGVRIFRV
DNPHTKAFGF WEWVIGDIQR EHPDVIFLAE AFTRPKVMHG LAKRGYTQSY TYFTWRNTRQ
ELQDYFTELN TAPGRDYFRP NAWPNTPDIL HAQLQGGEPA MFALRLVLAA TLSANYGIYG
PAYELLEHVP REPGSEEYRD SEKYQLRHWD LERPGNLRPL IARVNHIRRA HPALQADHSL
RFLPVDNEML LAYLKRSPDG RDVIVTVVNL DPHHAQSGWM RLTPADIAIA AGDPPAADWQ
MHDLLSQQRF LWQGDTHYVL LDPQRAPAHI FAVRRRVAGA GDIDPFQ
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