Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2022 |
Symbol | |
ID | 4667550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2199332 |
End bp | 2202760 |
Gene Length | 3429 bp |
Protein Length | 1142 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639823233 |
Product | trehalose synthase |
Protein accession | YP_970380 |
Protein GI | 120610702 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.113086 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCTC CCCTGCTGCG CCAACCCCTC CCGGCCGCGG ACGCCGCCGC CGGGCCGCTG CCCGAGCCGG GCCCCGTGGT GATGCCCGAA ACCCCGGAGA TCGACACGCA GGGCGACCCC CAGTGGTACC GCGACGCCGT CATCTACCAG TTGAACGTGA AAGCGTTCTT CGACAGCAAC AACGACGGCT ACGGCGACTT CAAGGGGGTG ACCGCCAAGC TGGACTACGT GAAGGACCTG GGCGTCAACA CGATCTGGCT CATGCCGTTC TACCCATCGC CGCTGCGCGA CGACGGCTAC GACATCTCCG ACTACGAGAA CGTGCATCCG CAGTACGGCA CCCTCGCGGA CTTCAAGGAG ATGCTCGACG CCGCGCACGC GCGCGGCCTG CGCGTGATCA CCGAGCTGGT CATCAACCAC ACGTCGTCCG AGCACCCCTG GTTCCAGCGC GCGCGGCGGG CCCCGCCCGG CTCCCCCGAG CGGGACTTCT ACGTCTGGAG CGATACCGAC CAGATCTACC GGGGCACGCG CATCATCTTC ACGGATACCG AAACCTCGAA CTGGGCCTGG GACCCGGTGG CCAAGCAGTA CTACTGGCAC CGCTTCTTCA GCCACCAGCC GGACCTGAAC TTCGACAACC CGCTGGTGCT GGAAGCCGTG TTCAAGACCA TGCGCTTCTG GCTGGACATG GGCGTGGACG GCTTCCGGCT CGACGCCATT CCCTACCTGG TGGAGCGCGA CGGCACCAGC AACGAGAACC TGCCCGAGAC GCACGCCGTC ATCAAGAAAC TGCGCGCGGC CATCGACGCC GAATACAGGA ACCGCTTCCT GCTCGCCGAG GCCAACATGT GGCCCGAGGA CGTGCGCGAG TATTTCGGCG ACGGCGACGA GTGCCACATG GCCTACCACT TCCCGCTGAT GCCGCGCATG TACATGGCGA TCGCCCAGGA AGACCGGCAC CCCATCGTCG AGATCCTGCA GCAGACGCCC GACATCCCCG AAGGCTGCCA GTGGGCCATC TTCCTGCGCA ACCATGACGA GCTCACGCTG GAGATGGTGA CCAGCAAGGA ACGCGACTAC ATGTACAGCA TGTACGCGGC CGACATGCGC GCGCGCATCA ACCTGGGCAT CCGCCGCCGG CTCGCGCCGC TGATGGAGAA CGACCTGGAC CGGGTCAAGC TCATGAACGG CATGCTGCTG TCCATGCCGG GCTCTCCCAT CATCTACTAC GGGGACGAGA TCGGCATGGG CGACAACGTC TTCGTGGGGG ACCGCAACGG CGTGCGCACG CCCATGCAGT GGTCGCCCGA CCGCAACGGC GGCTTCTCGC GCTCCGACCC GCAGCGGCTC TACCTGCAGC CCATCATGGA CGCGGTGTAC GGCTACGAGG CGCTGAACGT GGAGGCCCAG TCGGGCGACC ACAGCTCCCT GCTGCACTGG ACGCGCCGCA TGCTGGCCGT GCGCAAGACC AGCCGCGCCT TCGGCCGCGG GCGCCGCACC TTCCTCAAGC CCGGCAACCG CAAGATCCTG GCGTACGTGA GCGAACACGA GGACGACGTC ATCCTCACGG TGTTCAACCT CTCGCGCGCC GCCCAGCCGG TGGAGCTGGA CCTGTCGGCC TACCGGGGCC GCACGCCGAT CGAGATGCTG GGGCGGGTCA CCTTCCCGCC CATCGGCGAC CTGCCCTACC TGCTCACCCT GCACTCCTAC GGCTTCTACT GGTTCCGCCT CTCCAACGAA GCCCCGATGC CCTCGTGGCA CCAGGAGGGC CTGGACCTGC AGGAAAGGCC CGTGCTCGTG CTGTTCGACG GGTGGACCAG CTTCTTCCGC GAACGCGTCA TGCCCTGGCG CATCGGCATG GCCGAGCGCA TGCGCGCGCA ATTCGAGGAC GACACCCTGC CGCGCTTCAT CGAGCTGCAG CGCTGGTATG CGGACAAGGG CGCGACCATC GCCGGCGCGC GCATCCTGGA CCACACGGTC TGGAAGGCCG GCGAAGGCTG CGAATGGATG CTGCCGCTGC TGGGCGTGGA GCCGGCCGCG AAGCCCGGCG GCGCCCAGGG GGCGGGCGCG ACCTACTTCG TGCCCCTGGC CCTGGCCTGG GAAGAAGGCA GCGAGGAGCG CATGCGCCGC ATCTCTCCGG CCGGCGTGGC GCGCGTGCGC CAGCAGGCCC AGGTGGGCGT GATGGGCGAT GCCTTCCACG ACGAGTCCTT CTGCCGCATG GTGGTGCGTG CCATGGGCGA AGGCACCGAA CTCGCCACCG ACCAGGGCGG ACGGGTGCGA TTCCGGCGCA CCTCGGCCTT CGACGCGCTG GCCGCGGAAC TGGACACGCT GCCCGTGGAG CGCCCCGGCG CCCAGAGCAG CAACACCGTG GTCGCCCTCG GCGAAACCCT GTTCCTCAAG GGCTACCGCC GCCTGCGCGA GGGCGTGAAT CCCGAACTGG AGGTCGGCCG CTTCCTCACG GAGGTCGCCC GCTTCCCGCA CTGCGTGCCG GTGGCGGGAT CGGTGGAGTA CGTGGCGCCG GACGGCGCCA CCATGACGCT CGCGCTGGTG CAGTCCTATG TGGCCAACCA GGGCGACGGA TGGGAGTACA CGCTCGGCTA CCTGGAGCGC TTCCTCGAAG ACACACGCCT GGCGCAGGCG GCCGGCCCCG TGGCGGACAT GCACGGCGGC TATCTGGCCC TGGCCGCCAC CCTGGGCCAG CGCACGGCGC AACTGCACCA GGCGCTGGCC CGGCGCACCG GCGATGCCGC CTTCGACCCC GAACCCGTCA CCACGCAGGA CGTGGCCGCC TTCGGCCAGC GCGCGCGCGC CGAGGCCGAG GACACGCTCG TCCTGCTGGA GCGGCGCCTG GGCGAACTGC CGCCGGCGGC GCAGACGGAC GCCCAGGCGG TGCTGGCGCG GCGCGCCCTC ATCATGGAGC GCCTCGCGGC CGGCGGCGCG GACGCGCCCG CGGGCACCAA GACCCGCTTC CACGGCGACT ACCACCTGGG CCAGGTGCTG GTGACGGGCA ATGATTTCGT CATCATCGAT TTCGAAGGCG AACCCGGCCG GCCGTTCGAG GAACGCCGCG CCAAGAGTTC GCCCCTGCGC GACGTGGCCG GCATGCTGCG CTCGTTCAAC TACGCGCGCT GGGCCGCCCT CAAGCACATG ACCCAGTCCA CCGAGGAGAT GGTGCGCCTG GACGAGGCCG CGCGGCACTG GGAGCACCAG GTCCGCGATG CCTTCCTGGC CGCCTACGCG GCGGAAGGCC TTGCGGCCGA TCCCGCCCTG ATCTCCCTGT TCGAGCTGGA GAAGGCACTC TACGAACTCC GCTACGAACT GGGCAACCGC GTGGACTGGG CCCAGGTGCC GCTGCAAGGC ATCCTGGCGC TGATCGGCGC GGCCGCGGCG CCCACGCCCA CGCCGAACCT GCCCGACACC CCCGCCTGA
|
Protein sequence | MNAPLLRQPL PAADAAAGPL PEPGPVVMPE TPEIDTQGDP QWYRDAVIYQ LNVKAFFDSN NDGYGDFKGV TAKLDYVKDL GVNTIWLMPF YPSPLRDDGY DISDYENVHP QYGTLADFKE MLDAAHARGL RVITELVINH TSSEHPWFQR ARRAPPGSPE RDFYVWSDTD QIYRGTRIIF TDTETSNWAW DPVAKQYYWH RFFSHQPDLN FDNPLVLEAV FKTMRFWLDM GVDGFRLDAI PYLVERDGTS NENLPETHAV IKKLRAAIDA EYRNRFLLAE ANMWPEDVRE YFGDGDECHM AYHFPLMPRM YMAIAQEDRH PIVEILQQTP DIPEGCQWAI FLRNHDELTL EMVTSKERDY MYSMYAADMR ARINLGIRRR LAPLMENDLD RVKLMNGMLL SMPGSPIIYY GDEIGMGDNV FVGDRNGVRT PMQWSPDRNG GFSRSDPQRL YLQPIMDAVY GYEALNVEAQ SGDHSSLLHW TRRMLAVRKT SRAFGRGRRT FLKPGNRKIL AYVSEHEDDV ILTVFNLSRA AQPVELDLSA YRGRTPIEML GRVTFPPIGD LPYLLTLHSY GFYWFRLSNE APMPSWHQEG LDLQERPVLV LFDGWTSFFR ERVMPWRIGM AERMRAQFED DTLPRFIELQ RWYADKGATI AGARILDHTV WKAGEGCEWM LPLLGVEPAA KPGGAQGAGA TYFVPLALAW EEGSEERMRR ISPAGVARVR QQAQVGVMGD AFHDESFCRM VVRAMGEGTE LATDQGGRVR FRRTSAFDAL AAELDTLPVE RPGAQSSNTV VALGETLFLK GYRRLREGVN PELEVGRFLT EVARFPHCVP VAGSVEYVAP DGATMTLALV QSYVANQGDG WEYTLGYLER FLEDTRLAQA AGPVADMHGG YLALAATLGQ RTAQLHQALA RRTGDAAFDP EPVTTQDVAA FGQRARAEAE DTLVLLERRL GELPPAAQTD AQAVLARRAL IMERLAAGGA DAPAGTKTRF HGDYHLGQVL VTGNDFVIID FEGEPGRPFE ERRAKSSPLR DVAGMLRSFN YARWAALKHM TQSTEEMVRL DEAARHWEHQ VRDAFLAAYA AEGLAADPAL ISLFELEKAL YELRYELGNR VDWAQVPLQG ILALIGAAAA PTPTPNLPDT PA
|
| |